Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 THA1P-201ENST00000590384 1145 ntBASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 AC120498.9-201ENST00000339021 3867 ntBASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.92□□□□□ -0.02
CHCHD1Q96BP2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 AC019171.1-201ENST00000601251 1056 ntBASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 SNX5-217ENST00000606557 1087 ntBASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHCHD1Q96BP2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHCHD1Q96BP2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 AIRN-201ENST00000601203 4374 ntBASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 AL138781.2-201ENST00000617896 1843 ntBASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 AC092720.2-201ENST00000602388 1665 ntBASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CHCHD1Q96BP2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHCHD1Q96BP2 AC093484.2-201ENST00000580996 2166 ntBASIC14.88□□□□□ -0.03
CHCHD1Q96BP2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHCHD1Q96BP2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHCHD1Q96BP2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.88□□□□□ -0.03
CHCHD1Q96BP2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms