Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM3P06753 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM3P06753 AC009237.3-201ENST00000393279 1427 ntBASIC22.89■■□□□ 1.25
TPM3P06753 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
TPM3P06753 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TPM3P06753 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
TPM3P06753 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
TPM3P06753 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TPM3P06753 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TPM3P06753 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.88■■□□□ 1.25
TPM3P06753 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TPM3P06753 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.88■■□□□ 1.25
TPM3P06753 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.88■■□□□ 1.25
TPM3P06753 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.87■■□□□ 1.25
TPM3P06753 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.87■■□□□ 1.25
TPM3P06753 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.87■■□□□ 1.25
TPM3P06753 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
TPM3P06753 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
TPM3P06753 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
TPM3P06753 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TPM3P06753 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
TPM3P06753 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.86■■□□□ 1.25
TPM3P06753 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.86■■□□□ 1.25
TPM3P06753 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
TPM3P06753 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.86■■□□□ 1.25
TPM3P06753 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TPM3P06753 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.85■■□□□ 1.25
TPM3P06753 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 TCF3P1-201ENST00000423021 1937 ntBASIC22.85■■□□□ 1.25
TPM3P06753 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.85■■□□□ 1.25
TPM3P06753 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.85■■□□□ 1.25
TPM3P06753 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TPM3P06753 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.85■■□□□ 1.25
TPM3P06753 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TPM3P06753 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.84■■□□□ 1.25
TPM3P06753 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
TPM3P06753 TNXA-203ENST00000507684 2038 ntBASIC22.84■■□□□ 1.25
TPM3P06753 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
TPM3P06753 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 FP700111.2-201ENST00000619190 1892 ntBASIC22.84■■□□□ 1.25
TPM3P06753 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
TPM3P06753 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
TPM3P06753 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
TPM3P06753 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.84■■□□□ 1.25
TPM3P06753 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.84■■□□□ 1.25
TPM3P06753 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TPM3P06753 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.84■■□□□ 1.25
TPM3P06753 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.83■■□□□ 1.25
TPM3P06753 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TPM3P06753 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
TPM3P06753 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.83■■□□□ 1.25
TPM3P06753 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.83■■□□□ 1.25
TPM3P06753 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.83■■□□□ 1.25
TPM3P06753 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.83■■□□□ 1.25
TPM3P06753 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
TPM3P06753 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.83■■□□□ 1.25
TPM3P06753 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.83■■□□□ 1.25
TPM3P06753 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TPM3P06753 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TPM3P06753 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TPM3P06753 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TPM3P06753 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.83■■□□□ 1.24
TPM3P06753 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TPM3P06753 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TPM3P06753 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TPM3P06753 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TPM3P06753 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms