Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 AC073314.1-201ENST00000568729 2216 ntBASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 AC011484.1-201ENST00000377652 1995 ntBASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHRNA9Q9UGM1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CHRNA9Q9UGM1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 TERF1P5-201ENST00000477545 1207 ntBASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHRNA9Q9UGM1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AC116050.2-201ENST00000612102 1779 ntBASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AC091799.1-201ENST00000422823 811 ntBASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CHRNA9Q9UGM1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AC011767.1-201ENST00000617410 1153 ntBASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AC013268.1-206ENST00000638368 961 ntBASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AC112229.1-201ENST00000639295 961 ntBASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA9Q9UGM1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA9Q9UGM1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRNA9Q9UGM1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms