Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 TMEM179-206ENST00000616017 1645 ntBASIC21.04■□□□□ 0.96
VIPAS39Q9H9C1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 Z82202.1-201ENST00000623446 1880 ntBASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VIPAS39Q9H9C1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VIPAS39Q9H9C1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VIPAS39Q9H9C1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VIPAS39Q9H9C1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.02■□□□□ 0.95
VIPAS39Q9H9C1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.01■□□□□ 0.95
VIPAS39Q9H9C1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VIPAS39Q9H9C1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
VIPAS39Q9H9C1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 TREX1-205ENST00000625293 1783 ntBASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VIPAS39Q9H9C1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms