Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.821e-7■■□□□ 12.3
CSTF2P33240 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.26□□□□□ -0.931e-7■■□□□ 12.3
CSTF2P33240 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -11e-7■■□□□ 12.3
CSTF2P33240 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.011e-7■■□□□ 12.3
CSTF2P33240 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.71□□□□□ -1.011e-7■■□□□ 12.3
CSTF2P33240 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.49□□□□□ -1.051e-7■■□□□ 12.3
CSTF2P33240 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.48□□□□□ -1.051e-7■■□□□ 12.3
CSTF2P33240 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.3□□□□□ -1.081e-7■■□□□ 12.3
CSTF2P33240 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.27□□□□□ -1.091e-7■■□□□ 12.3
CSTF2P33240 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.27□□□□□ -1.091e-7■■□□□ 12.3
CSTF2P33240 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.24□□□□□ -1.091e-7■■□□□ 12.3
CSTF2P33240 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.24□□□□□ -1.091e-7■■□□□ 12.3
CSTF2P33240 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.24□□□□□ -1.091e-7■■□□□ 12.3
CSTF2P33240 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.04□□□□□ -1.121e-7■■□□□ 12.3
CSTF2P33240 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.92□□□□□ -1.141e-7■■□□□ 12.3
CSTF2P33240 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.89□□□□□ -1.151e-7■■□□□ 12.3
CSTF2P33240 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.87□□□□□ -1.151e-7■■□□□ 12.3
CSTF2P33240 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.87□□□□□ -1.151e-7■■□□□ 12.3
CSTF2P33240 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.85□□□□□ -1.151e-7■■□□□ 12.3
CSTF2P33240 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.7□□□□□ -1.181e-7■■□□□ 12.3
CSTF2P33240 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.52□□□□□ -1.211e-7■■□□□ 12.3
CSTF2P33240 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.46□□□□□ -1.221e-7■■□□□ 12.3
CSTF2P33240 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.11□□□□□ -1.271e-7■■□□□ 12.3
CSTF2P33240 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.11□□□□□ -1.271e-7■■□□□ 12.3
CSTF2P33240 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.91□□□□□ -1.31e-7■■□□□ 12.3
CSTF2P33240 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.85□□□□□ -1.311e-7■■□□□ 12.3
CSTF2P33240 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.59□□□□□ -1.361e-7■■□□□ 12.3
CSTF2P33240 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.59□□□□□ -1.361e-7■■□□□ 12.3
CSTF2P33240 CIRBP-205ENST00000585913 833 ntTSL 321.34■■□□□ 1.011e-14■■□□□ 12.3
CSTF2P33240 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.961e-14■■□□□ 12.3
CSTF2P33240 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.831e-14■■□□□ 12.3
CSTF2P33240 CIRBP-220ENST00000588917 1087 ntTSL 218.9■□□□□ 0.621e-14■■□□□ 12.3
CSTF2P33240 CIRBP-232ENST00000591376 830 ntTSL 318.19■□□□□ 0.51e-14■■□□□ 12.3
CSTF2P33240 CIRBP-237ENST00000592234 571 ntTSL 518.19■□□□□ 0.51e-14■■□□□ 12.3
CSTF2P33240 CIRBP-210ENST00000586636 938 ntTSL 218.19■□□□□ 0.51e-14■■□□□ 12.3
CSTF2P33240 CIRBP-227ENST00000590188 361 ntTSL 317.69■□□□□ 0.421e-14■■□□□ 12.3
CSTF2P33240 CIRBP-203ENST00000444172 584 ntTSL 317.3■□□□□ 0.361e-14■■□□□ 12.3
CSTF2P33240 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.341e-14■■□□□ 12.3
CSTF2P33240 CIRBP-206ENST00000585914 1052 ntTSL 516.85■□□□□ 0.291e-14■■□□□ 12.3
CSTF2P33240 CIRBP-212ENST00000587169 3028 ntTSL 216.03■□□□□ 0.161e-14■■□□□ 12.3
CSTF2P33240 CIRBP-228ENST00000590347 3117 ntTSL 214.8□□□□□ -0.041e-14■■□□□ 12.3
CSTF2P33240 CIRBP-242ENST00000593093 3528 ntTSL 213.65□□□□□ -0.221e-14■■□□□ 12.3
CSTF2P33240 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.798e-8■■□□□ 12.2
CSTF2P33240 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.798e-8■■□□□ 12.2
CSTF2P33240 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.35■□□□□ 0.218e-8■■□□□ 12.2
CSTF2P33240 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.688e-8■■□□□ 12.2
CSTF2P33240 AC097637.1-202ENST00000478201 570 ntTSL 210.78□□□□□ -0.688e-8■■□□□ 12.2
CSTF2P33240 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.413e-7■■□□□ 12.2
CSTF2P33240 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC10.77□□□□□ -0.693e-7■■□□□ 12.2
CSTF2P33240 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC10□□□□□ -0.813e-7■■□□□ 12.2
CSTF2P33240 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.62□□□□□ -1.033e-7■■□□□ 12.2
CSTF2P33240 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.33□□□□□ -1.083e-7■■□□□ 12.2
CSTF2P33240 ZNF621-207ENST00000490457 916 ntTSL 315.02■□□□□ -04e-7■■□□□ 12.2
CSTF2P33240 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.09□□□□□ -0.474e-7■■□□□ 12.2
CSTF2P33240 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-10■■□□□ 12.2
CSTF2P33240 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.11□□□□□ -0.315e-8■■□□□ 12.2
CSTF2P33240 SNX1-203ENST00000558040 774 ntTSL 516.03■□□□□ 0.163e-6■■□□□ 12.2
CSTF2P33240 DUSP16-204ENST00000539940 566 ntTSL 45.8□□□□□ -1.486e-7■■□□□ 12.2
CSTF2P33240 DUSP16-205ENST00000541207 585 ntTSL 45.41□□□□□ -1.546e-7■■□□□ 12.2
CSTF2P33240 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.81□□□□□ -1.324e-7■■□□□ 12.2
CSTF2P33240 HSD17B12-204ENST00000527213 571 ntTSL 45.25□□□□□ -1.572e-7■■□□□ 12.2
CSTF2P33240 HSD17B12-207ENST00000532178 403 ntTSL 55.25□□□□□ -1.572e-7■■□□□ 12.2
CSTF2P33240 DENND5B-206ENST00000545147 566 ntTSL 222.54■■□□□ 1.23e-11■■□□□ 12.2
CSTF2P33240 DENND5B-205ENST00000544698 643 ntTSL 321.37■■□□□ 1.013e-11■■□□□ 12.2
CSTF2P33240 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.73■□□□□ 0.273e-11■■□□□ 12.2
CSTF2P33240 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.063e-11■■□□□ 12.2
CSTF2P33240 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC10.07□□□□□ -0.83e-11■■□□□ 12.2
CSTF2P33240 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.132e-8■■□□□ 12.1
CSTF2P33240 PSMD14-203ENST00000477232 4890 ntTSL 1 (best)2.11□□□□□ -2.072e-8■■□□□ 12.1
CSTF2P33240 SLCO4A1-205ENST00000466961 819 ntTSL 312.9□□□□□ -0.341e-7■■□□□ 12.1
CSTF2P33240 SMG1-208ENST00000563448 2016 ntTSL 29.58□□□□□ -0.881e-7■■□□□ 12.1
CSTF2P33240 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.51□□□□□ -1.051e-7■■□□□ 12.1
CSTF2P33240 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.171e-7■■□□□ 12.1
CSTF2P33240 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.321e-7■■□□□ 12.1
CSTF2P33240 SMG1-211ENST00000565324 12465 ntTSL 1 (best)5.03□□□□□ -1.61e-7■■□□□ 12.1
CSTF2P33240 SMG1-206ENST00000562668 449 ntTSL 34.24□□□□□ -1.731e-7■■□□□ 12.1
CSTF2P33240 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC12.2□□□□□ -0.468e-7■■□□□ 12.1
CSTF2P33240 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.2□□□□□ -0.468e-7■■□□□ 12.1
CSTF2P33240 G2E3-210ENST00000552488 786 ntTSL 311.83□□□□□ -0.528e-7■■□□□ 12.1
CSTF2P33240 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.738e-7■■□□□ 12.1
CSTF2P33240 G2E3-203ENST00000544007 1003 ntTSL 24.19□□□□□ -1.748e-7■■□□□ 12.1
CSTF2P33240 G2E3-209ENST00000550944 565 ntTSL 22.22□□□□□ -2.058e-7■■□□□ 12.1
CSTF2P33240 ATXN10-211ENST00000498009 873 ntTSL 521.5■■□□□ 1.035e-11■■□□□ 12
CSTF2P33240 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-7■■□□□ 12
CSTF2P33240 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC11.85□□□□□ -0.515e-11■■□□□ 12
CSTF2P33240 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.911e-7■■□□□ 12
CSTF2P33240 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.411e-7■■□□□ 12
CSTF2P33240 RPS4Y1-203ENST00000477725 998 ntTSL 25.78□□□□□ -1.483e-14■■□□□ 12
CSTF2P33240 RPS4Y1-202ENST00000430575 811 ntTSL 35.74□□□□□ -1.493e-14■■□□□ 12
CSTF2P33240 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.65e-11■■□□□ 12
CSTF2P33240 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.773e-14■■□□□ 12
CSTF2P33240 RPS4Y1-204ENST00000515575 454 ntTSL 33.34□□□□□ -1.873e-14■■□□□ 12
CSTF2P33240 AC022137.1-201ENST00000483735 151 ntBASIC-0.51□□□□□ -2.491e-7■■□□□ 12
CSTF2P33240 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.251e-6■■□□□ 12
CSTF2P33240 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.98■■□□□ 1.111e-6■■□□□ 12
CSTF2P33240 PRELID1-205ENST00000504594 886 ntTSL 317.71■□□□□ 0.431e-6■■□□□ 12
CSTF2P33240 EWSR1-205ENST00000360091 1289 ntTSL 519.36■□□□□ 0.691e-7■■□□□ 12
CSTF2P33240 EWSR1-218ENST00000483629 1818 ntTSL 516.81■□□□□ 0.281e-7■■□□□ 12
CSTF2P33240 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.251e-7■■□□□ 12
CSTF2P33240 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.43■□□□□ 0.221e-7■■□□□ 12
Retrieved 100 of 6,735 protein–RNA pairs in 189.6 ms