Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 PBX2P1-201ENST00000493219 1291 ntBASIC18.55■□□□□ 0.56
SHFQ7M4L6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHFQ7M4L6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
SHFQ7M4L6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 TSPY26P-201ENST00000476365 1326 ntBASIC18.54■□□□□ 0.56
SHFQ7M4L6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHFQ7M4L6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.54■□□□□ 0.56
SHFQ7M4L6 AC005224.4-201ENST00000583262 1652 ntBASIC18.54■□□□□ 0.56
SHFQ7M4L6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 EDA-201ENST00000338901 1233 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 AC096631.2-201ENST00000436136 790 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 AC106739.1-201ENST00000617035 715 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 BX005040.4-201ENST00000637145 1518 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.53■□□□□ 0.56
SHFQ7M4L6 AC099778.1-201ENST00000568593 1911 ntBASIC18.53■□□□□ 0.56
SHFQ7M4L6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHFQ7M4L6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHFQ7M4L6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHFQ7M4L6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHFQ7M4L6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHFQ7M4L6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHFQ7M4L6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHFQ7M4L6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SHFQ7M4L6 AL162377.1-201ENST00000618844 1793 ntBASIC18.52■□□□□ 0.55
SHFQ7M4L6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHFQ7M4L6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SHFQ7M4L6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHFQ7M4L6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SHFQ7M4L6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHFQ7M4L6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 MIR572-201ENST00000384983 95 ntBASIC18.51■□□□□ 0.55
SHFQ7M4L6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.51■□□□□ 0.55
SHFQ7M4L6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms