RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
UBAP1-204ENST00000625521 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.84
UBAP1-204ENST00000625521 ZCCHC6Q5VYS8 1495 aaKnown RBP37.74■■■■□ 3.63
UBAP1-204ENST00000625521 DCAF1Q9Y4B6 1507 aa37.13■■■■□ 3.53
UBAP1-204ENST00000625521 DCAF8L2P0C7V8 631 aa36.98■■■■□ 3.51
UBAP1-204ENST00000625521 ABCC9O60706 1549 aa36.71■■■■□ 3.47
UBAP1-204ENST00000625521 SHROOM4Q9ULL8 1493 aa36.7■■■■□ 3.47
UBAP1-204ENST00000625521 MYO15BQ96JP2 1530 aa36.62■■■■□ 3.45
UBAP1-204ENST00000625521 NACADO15069 1562 aa36.32■■■■□ 3.4
UBAP1-204ENST00000625521 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.35
UBAP1-204ENST00000625521 SCRIBQ14160 1630 aa35.89■■■■□ 3.34
UBAP1-204ENST00000625521 SUPT5HO00267 1087 aaKnown RBP35.43■■■■□ 3.26
UBAP1-204ENST00000625521 UNC13AQ9UPW8 1703 aa35.14■■■■□ 3.22
UBAP1-204ENST00000625521 RSF1Q96T23 1441 aaPredicted RBP34.88■■■■□ 3.17
UBAP1-204ENST00000625521 BICRAQ9NZM4 1560 aa34.83■■■■□ 3.17
UBAP1-204ENST00000625521 CECR2Q9BXF3 1484 aa34.82■■■■□ 3.16
UBAP1-204ENST00000625521 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
UBAP1-204ENST00000625521 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
UBAP1-204ENST00000625521 BAZ1AQ9NRL2 1556 aaPredicted RBP34.64■■■■□ 3.14
UBAP1-204ENST00000625521 SMARCA4P51532 1647 aa34.43■■■■□ 3.1
UBAP1-204ENST00000625521 WIZO95785 1651 aa34.35■■■■□ 3.09
UBAP1-204ENST00000625521 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
UBAP1-204ENST00000625521 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
UBAP1-204ENST00000625521 PEG3Q9GZU2 1588 aa34.03■■■■□ 3.04
UBAP1-204ENST00000625521 ATAD2BQ9ULI0 1458 aa33.84■■■■□ 3.01
UBAP1-204ENST00000625521 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
UBAP1-204ENST00000625521 EIF4G1Q04637 1599 aaKnown RBP33.79■■■■□ 3
UBAP1-204ENST00000625521 CCDC88BA6NC98 1476 aa33.69■■■□□ 2.98
UBAP1-204ENST00000625521 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
UBAP1-204ENST00000625521 NCAPD3P42695 1498 aa33.53■■■□□ 2.96
UBAP1-204ENST00000625521 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
UBAP1-204ENST00000625521 TRIM41Q8WV44 630 aa33.33■■■□□ 2.93
UBAP1-204ENST00000625521 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
UBAP1-204ENST00000625521 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
UBAP1-204ENST00000625521 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
UBAP1-204ENST00000625521 CFTRP13569 1480 aa32.84■■■□□ 2.85
UBAP1-204ENST00000625521 LOC105371045A0A1W2PR82 267 aa32.7■■■□□ 2.83
UBAP1-204ENST00000625521 CADPSQ9ULU8 1353 aa32.69■■■□□ 2.82
UBAP1-204ENST00000625521 FAM9AQ8IZU1 332 aaPredicted RBP32.68■■■□□ 2.82
UBAP1-204ENST00000625521 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
UBAP1-204ENST00000625521 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
UBAP1-204ENST00000625521 TOP2BQ02880 1626 aa32.53■■■□□ 2.8
UBAP1-204ENST00000625521 EEA1Q15075 1411 aa32.51■■■□□ 2.79
UBAP1-204ENST00000625521 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
UBAP1-204ENST00000625521 SOGA1O94964 1423 aa32.47■■■□□ 2.79
UBAP1-204ENST00000625521 CUX1P39880 1505 aa32.39■■■□□ 2.78
UBAP1-204ENST00000625521 LAMC3Q9Y6N6 1575 aa32.35■■■□□ 2.77
UBAP1-204ENST00000625521 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
UBAP1-204ENST00000625521 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
UBAP1-204ENST00000625521 PCGF6Q9BYE7 350 aa32.3■■■□□ 2.76
UBAP1-204ENST00000625521 DNAJC5BQ9UF47 199 aa32.29■■■□□ 2.76
UBAP1-204ENST00000625521 NESP48681 1621 aa32.28■■■□□ 2.76
UBAP1-204ENST00000625521 CSRNP3Q8WYN3 585 aa32.28■■■□□ 2.76
UBAP1-204ENST00000625521 HRCP23327 699 aa32.25■■■□□ 2.75
UBAP1-204ENST00000625521 EHMT2Q96KQ7 1210 aa32.19■■■□□ 2.74
UBAP1-204ENST00000625521 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
UBAP1-204ENST00000625521 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
UBAP1-204ENST00000625521 DNMBPQ6XZF7 1577 aa32.06■■■□□ 2.72
UBAP1-204ENST00000625521 GOLGA3Q08378 1498 aa32.04■■■□□ 2.72
UBAP1-204ENST00000625521 KIF21BO75037 1637 aa32.03■■■□□ 2.72
UBAP1-204ENST00000625521 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.72
UBAP1-204ENST00000625521 KIF27Q86VH2 1401 aa32.01■■■□□ 2.71
UBAP1-204ENST00000625521 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
UBAP1-204ENST00000625521 TOPBP1Q92547 1522 aa31.97■■■□□ 2.71
UBAP1-204ENST00000625521 URB2Q14146 1524 aaKnown RBP31.88■■■□□ 2.69
UBAP1-204ENST00000625521 UBTFP17480 764 aaKnown RBP31.88■■■□□ 2.69
UBAP1-204ENST00000625521 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
UBAP1-204ENST00000625521 CUX2O14529 1486 aa31.86■■■□□ 2.69
UBAP1-204ENST00000625521 TRIM26Q12899 539 aaPredicted RBP31.85■■■□□ 2.69
UBAP1-204ENST00000625521 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
UBAP1-204ENST00000625521 PRXQ9BXM0 1461 aa31.83■■■□□ 2.69
UBAP1-204ENST00000625521 CEP162Q5TB80 1403 aa31.81■■■□□ 2.68
UBAP1-204ENST00000625521 RAPGEF2Q9Y4G8 1499 aa31.81■■■□□ 2.68
UBAP1-204ENST00000625521 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
UBAP1-204ENST00000625521 ABCA10Q8WWZ4 1543 aa31.76■■■□□ 2.67
UBAP1-204ENST00000625521 RAD54L2Q9Y4B4 1467 aa31.72■■■□□ 2.67
UBAP1-204ENST00000625521 IGF1RP08069 1367 aa31.68■■■□□ 2.66
UBAP1-204ENST00000625521 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
UBAP1-204ENST00000625521 WDR97A6NE52 1622 aa31.58■■■□□ 2.65
UBAP1-204ENST00000625521 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
UBAP1-204ENST00000625521 CLIP1P30622 1438 aa31.53■■■□□ 2.64
UBAP1-204ENST00000625521 PPARGC1BQ86YN6 1023 aaKnown RBP31.51■■■□□ 2.64
UBAP1-204ENST00000625521 WDR62O43379 1518 aa31.49■■■□□ 2.63
UBAP1-204ENST00000625521 ERCC6Q03468 1493 aa31.49■■■□□ 2.63
UBAP1-204ENST00000625521 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
UBAP1-204ENST00000625521 ABCA5Q8WWZ7 1642 aa31.45■■■□□ 2.63
UBAP1-204ENST00000625521 CUL7Q14999 1698 aa31.41■■■□□ 2.62
UBAP1-204ENST00000625521 TDRD9Q8NDG6 1382 aaKnown RBP31.4■■■□□ 2.62
UBAP1-204ENST00000625521 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
UBAP1-204ENST00000625521 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
UBAP1-204ENST00000625521 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
UBAP1-204ENST00000625521 VPS8Q8N3P4 1428 aa31.29■■■□□ 2.6
UBAP1-204ENST00000625521 RANGAP1P46060 587 aaPredicted RBP31.26■■■□□ 2.59
UBAP1-204ENST00000625521 ARAP1Q96P48 1450 aa31.18■■■□□ 2.58
UBAP1-204ENST00000625521 AQRO60306 1485 aaKnown RBP eCLIP31.17■■■□□ 2.583e-7■■■■□ 19.7
UBAP1-204ENST00000625521 PBRM1Q86U86 1689 aa31.15■■■□□ 2.58
UBAP1-204ENST00000625521 ARHGAP35Q9NRY4 1499 aa31.14■■■□□ 2.58
UBAP1-204ENST00000625521 GRIN2BQ13224 1484 aa31.14■■■□□ 2.58
UBAP1-204ENST00000625521 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
UBAP1-204ENST00000625521 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms