Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN15P56746 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN15P56746 MKRN4P-201ENST00000444706 1521 ntBASIC18.55■□□□□ 0.56
CLDN15P56746 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.55■□□□□ 0.56
CLDN15P56746 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN15P56746 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN15P56746 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN15P56746 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN15P56746 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN15P56746 AC026310.3-201ENST00000625186 2373 ntBASIC18.55■□□□□ 0.56
CLDN15P56746 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN15P56746 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN15P56746 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN15P56746 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN15P56746 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN15P56746 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN15P56746 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN15P56746 MIPEPP3-201ENST00000412105 444 ntBASIC18.54■□□□□ 0.56
CLDN15P56746 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN15P56746 AC007322.3-201ENST00000426526 701 ntBASIC18.54■□□□□ 0.56
CLDN15P56746 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN15P56746 AC098934.4-201ENST00000564127 592 ntBASIC18.54■□□□□ 0.56
CLDN15P56746 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN15P56746 AC116050.2-201ENST00000612102 1779 ntBASIC18.54■□□□□ 0.56
CLDN15P56746 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN15P56746 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN15P56746 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN15P56746 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN15P56746 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN15P56746 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN15P56746 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.53■□□□□ 0.56
CLDN15P56746 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN15P56746 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN15P56746 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN15P56746 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN15P56746 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN15P56746 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 AF106564.1-201ENST00000607058 2553 ntBASIC18.52■□□□□ 0.56
CLDN15P56746 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN15P56746 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN15P56746 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN15P56746 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.52■□□□□ 0.56
CLDN15P56746 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN15P56746 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN15P56746 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN15P56746 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN15P56746 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN15P56746 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CLDN15P56746 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CLDN15P56746 AL049796.1-201ENST00000565336 1766 ntBASIC18.51■□□□□ 0.55
CLDN15P56746 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN15P56746 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN15P56746 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN15P56746 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN15P56746 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN15P56746 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN15P56746 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN15P56746 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN15P56746 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN15P56746 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN15P56746 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLDN15P56746 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN15P56746 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLDN15P56746 BX276092.2-201ENST00000417668 665 ntBASIC18.5■□□□□ 0.55
CLDN15P56746 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
CLDN15P56746 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN15P56746 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN15P56746 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms