Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18■□□□□ 0.47
SHISA3A0PJX4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 SLC47A1P1-202ENST00000449666 945 ntBASIC18■□□□□ 0.47
SHISA3A0PJX4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18■□□□□ 0.47
SHISA3A0PJX4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18■□□□□ 0.47
SHISA3A0PJX4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SHISA3A0PJX4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SHISA3A0PJX4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHISA3A0PJX4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18■□□□□ 0.47
SHISA3A0PJX4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.99■□□□□ 0.47
SHISA3A0PJX4 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.99■□□□□ 0.47
SHISA3A0PJX4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.98■□□□□ 0.47
SHISA3A0PJX4 AC009299.2-201ENST00000482477 511 ntBASIC17.98■□□□□ 0.47
SHISA3A0PJX4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 SYT6-210ENST00000641643 1587 ntBASIC17.98■□□□□ 0.47
SHISA3A0PJX4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHISA3A0PJX4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHISA3A0PJX4 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.47
SHISA3A0PJX4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 AC092720.2-201ENST00000602388 1665 ntBASIC17.96■□□□□ 0.47
SHISA3A0PJX4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 TNXA-203ENST00000507684 2038 ntBASIC17.96■□□□□ 0.47
SHISA3A0PJX4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SHISA3A0PJX4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHISA3A0PJX4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.96■□□□□ 0.46
SHISA3A0PJX4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SHISA3A0PJX4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms