RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 NISCHQ9Y2I1 1504 aa45.85■■■■■ 4.93
CDH5-202ENST00000539168 CCDC180Q9P1Z9 1646 aa40.06■■■■■ 4
CDH5-202ENST00000539168 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
CDH5-202ENST00000539168 DCAF1Q9Y4B6 1507 aa38.04■■■■□ 3.68
CDH5-202ENST00000539168 DCAF8L2P0C7V8 631 aa37.7■■■■□ 3.63
CDH5-202ENST00000539168 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
CDH5-202ENST00000539168 ABCC9O60706 1549 aa37.61■■■■□ 3.61
CDH5-202ENST00000539168 NACADO15069 1562 aa37.3■■■■□ 3.56
CDH5-202ENST00000539168 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
CDH5-202ENST00000539168 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
CDH5-202ENST00000539168 SCRIBQ14160 1630 aa36.65■■■■□ 3.46
CDH5-202ENST00000539168 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
CDH5-202ENST00000539168 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
CDH5-202ENST00000539168 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
CDH5-202ENST00000539168 RSF1Q96T23 1441 aaPredicted RBP35.55■■■■□ 3.28
CDH5-202ENST00000539168 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
CDH5-202ENST00000539168 BAZ1AQ9NRL2 1556 aaPredicted RBP35.46■■■■□ 3.27
CDH5-202ENST00000539168 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
CDH5-202ENST00000539168 MROH2BQ7Z745 1585 aa35.34■■■■□ 3.25
CDH5-202ENST00000539168 SMARCA4P51532 1647 aa35.23■■■■□ 3.23
CDH5-202ENST00000539168 WIZO95785 1651 aa35.04■■■■□ 3.2
CDH5-202ENST00000539168 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
CDH5-202ENST00000539168 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
CDH5-202ENST00000539168 SMARCA2P51531 1590 aa34.7■■■■□ 3.15
CDH5-202ENST00000539168 EIF4G1Q04637 1599 aaKnown RBP34.66■■■■□ 3.14
CDH5-202ENST00000539168 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
CDH5-202ENST00000539168 CHIC1Q5VXU3 224 aa34.47■■■■□ 3.11
CDH5-202ENST00000539168 BAZ1BQ9UIG0 1483 aaKnown RBP34.47■■■■□ 3.11
CDH5-202ENST00000539168 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
CDH5-202ENST00000539168 CCDC88BA6NC98 1476 aa34.37■■■■□ 3.09
CDH5-202ENST00000539168 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
CDH5-202ENST00000539168 CC2D2AQ9P2K1 1620 aa34.1■■■■□ 3.05
CDH5-202ENST00000539168 TRIM41Q8WV44 630 aa33.89■■■■□ 3.02
CDH5-202ENST00000539168 CFTRP13569 1480 aa33.61■■■□□ 2.97
CDH5-202ENST00000539168 ABCC8Q09428 1581 aa33.58■■■□□ 2.97
CDH5-202ENST00000539168 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
CDH5-202ENST00000539168 CADPSQ9ULU8 1353 aa33.48■■■□□ 2.95
CDH5-202ENST00000539168 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
CDH5-202ENST00000539168 SYNJ1O43426 1573 aa33.28■■■□□ 2.92
CDH5-202ENST00000539168 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
CDH5-202ENST00000539168 LAMC3Q9Y6N6 1575 aa33.23■■■□□ 2.91
CDH5-202ENST00000539168 BIVM-ERCC5R4GMW8 1640 aa33.21■■■□□ 2.91
CDH5-202ENST00000539168 EEA1Q15075 1411 aa33.2■■■□□ 2.91
CDH5-202ENST00000539168 FAM9AQ8IZU1 332 aaPredicted RBP33.1■■■□□ 2.89
CDH5-202ENST00000539168 FANCD2Q9BXW9 1451 aa33.08■■■□□ 2.89
CDH5-202ENST00000539168 CUX1P39880 1505 aa33.06■■■□□ 2.88
CDH5-202ENST00000539168 LOC105371045A0A1W2PR82 267 aa33.04■■■□□ 2.88
CDH5-202ENST00000539168 NESP48681 1621 aa33■■■□□ 2.87
CDH5-202ENST00000539168 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
CDH5-202ENST00000539168 SOGA1O94964 1423 aa32.98■■■□□ 2.87
CDH5-202ENST00000539168 PDS5BQ9NTI5 1447 aa32.98■■■□□ 2.87
CDH5-202ENST00000539168 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
CDH5-202ENST00000539168 CSRNP3Q8WYN3 585 aa32.88■■■□□ 2.85
CDH5-202ENST00000539168 DNMBPQ6XZF7 1577 aa32.84■■■□□ 2.85
CDH5-202ENST00000539168 RUSC2Q8N2Y8 1516 aa32.81■■■□□ 2.84
CDH5-202ENST00000539168 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
CDH5-202ENST00000539168 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
CDH5-202ENST00000539168 KIF27Q86VH2 1401 aa32.71■■■□□ 2.83
CDH5-202ENST00000539168 KIF21AQ7Z4S6 1674 aa32.67■■■□□ 2.82
CDH5-202ENST00000539168 KIF21BO75037 1637 aa32.66■■■□□ 2.82
CDH5-202ENST00000539168 GOLGA3Q08378 1498 aa32.64■■■□□ 2.82
CDH5-202ENST00000539168 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
CDH5-202ENST00000539168 POLA1P09884 1462 aaPredicted RBP32.56■■■□□ 2.8
CDH5-202ENST00000539168 TNIKQ9UKE5 1360 aa32.55■■■□□ 2.8
CDH5-202ENST00000539168 CUX2O14529 1486 aa32.52■■■□□ 2.8
CDH5-202ENST00000539168 EHMT2Q96KQ7 1210 aa32.5■■■□□ 2.79
CDH5-202ENST00000539168 MRC2Q9UBG0 1479 aa32.5■■■□□ 2.79
CDH5-202ENST00000539168 ABCA10Q8WWZ4 1543 aa32.5■■■□□ 2.79
CDH5-202ENST00000539168 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
CDH5-202ENST00000539168 PRXQ9BXM0 1461 aa32.45■■■□□ 2.79
CDH5-202ENST00000539168 UBTFP17480 764 aaKnown RBP32.43■■■□□ 2.78
CDH5-202ENST00000539168 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
CDH5-202ENST00000539168 RAPGEF2Q9Y4G8 1499 aa32.35■■■□□ 2.77
CDH5-202ENST00000539168 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
CDH5-202ENST00000539168 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
CDH5-202ENST00000539168 IGF1RP08069 1367 aa32.33■■■□□ 2.77
CDH5-202ENST00000539168 WDR62O43379 1518 aa32.32■■■□□ 2.76
CDH5-202ENST00000539168 CEP162Q5TB80 1403 aa32.31■■■□□ 2.76
CDH5-202ENST00000539168 TARBP1Q13395 1621 aaKnown RBP32.22■■■□□ 2.75
CDH5-202ENST00000539168 CARMIL1Q5VZK9 1371 aa32.2■■■□□ 2.75
CDH5-202ENST00000539168 ABCA5Q8WWZ7 1642 aa32.19■■■□□ 2.74
CDH5-202ENST00000539168 CUL7Q14999 1698 aa32.18■■■□□ 2.74
CDH5-202ENST00000539168 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
CDH5-202ENST00000539168 IFT140Q96RY7 1462 aa32.15■■■□□ 2.74
CDH5-202ENST00000539168 GAPVD1Q14C86 1478 aa32.14■■■□□ 2.73
CDH5-202ENST00000539168 CLIP1P30622 1438 aa32.08■■■□□ 2.73
CDH5-202ENST00000539168 TDRD9Q8NDG6 1382 aaKnown RBP32.07■■■□□ 2.72
CDH5-202ENST00000539168 PBRM1Q86U86 1689 aa31.93■■■□□ 2.7
CDH5-202ENST00000539168 GRIN2BQ13224 1484 aa31.91■■■□□ 2.7
CDH5-202ENST00000539168 AQRO60306 1485 aaKnown RBP eCLIP31.85■■■□□ 2.69
CDH5-202ENST00000539168 VPS8Q8N3P4 1428 aa31.83■■■□□ 2.69
CDH5-202ENST00000539168 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
CDH5-202ENST00000539168 ZNF608Q9ULD9 1512 aaPredicted RBP31.8■■■□□ 2.68
CDH5-202ENST00000539168 TRIM26Q12899 539 aaPredicted RBP31.79■■■□□ 2.68
CDH5-202ENST00000539168 EIF4G3O43432 1585 aaKnown RBP31.77■■■□□ 2.68
CDH5-202ENST00000539168 ADAMTS12P58397 1594 aa31.77■■■□□ 2.68
CDH5-202ENST00000539168 CTTNBP2Q8WZ74 1663 aa31.76■■■□□ 2.68
CDH5-202ENST00000539168 ARHGAP35Q9NRY4 1499 aa31.7■■■□□ 2.67
CDH5-202ENST00000539168 RANGAP1P46060 587 aaPredicted RBP31.7■■■□□ 2.66
CDH5-202ENST00000539168 ARAP1Q96P48 1450 aa31.7■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms