RNA–Protein interactions for RNA: ENST00000560869.5

TNFAIP2-209, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP2, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-209ENST00000560869 DCAF8L2P0C7V8 631 aa35.15■■■■□ 3.22
TNFAIP2-209ENST00000560869 NISCHQ9Y2I1 1504 aa34.87■■■■□ 3.17
TNFAIP2-209ENST00000560869 SUPT5HO00267 1087 aaKnown RBP34.13■■■■□ 3.05
TNFAIP2-209ENST00000560869 SHROOM4Q9ULL8 1493 aa33.55■■■□□ 2.96
TNFAIP2-209ENST00000560869 EHMT2Q96KQ7 1210 aa32.96■■■□□ 2.87
TNFAIP2-209ENST00000560869 PCGF6Q9BYE7 350 aa32.44■■■□□ 2.78
TNFAIP2-209ENST00000560869 FAM9AQ8IZU1 332 aaPredicted RBP32.17■■■□□ 2.74
TNFAIP2-209ENST00000560869 TTBK1Q5TCY1 1321 aaPredicted RBP31.89■■■□□ 2.69
TNFAIP2-209ENST00000560869 APLP2Q06481 763 aa31.5■■■□□ 2.63
TNFAIP2-209ENST00000560869 PELP1Q8IZL8 1130 aaKnown RBP31.47■■■□□ 2.63
TNFAIP2-209ENST00000560869 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
TNFAIP2-209ENST00000560869 CCER1Q8TC90 406 aaPredicted RBP31.28■■■□□ 2.6
TNFAIP2-209ENST00000560869 ZEB1P37275 1124 aaPredicted RBP31.22■■■□□ 2.59
TNFAIP2-209ENST00000560869 RANGAP1P46060 587 aaPredicted RBP31.19■■■□□ 2.58
TNFAIP2-209ENST00000560869 CENPBP07199 599 aaPredicted RBP31.15■■■□□ 2.58
TNFAIP2-209ENST00000560869 PPARGC1BQ86YN6 1023 aaKnown RBP31.1■■■□□ 2.57
TNFAIP2-209ENST00000560869 HRCP23327 699 aa31.04■■■□□ 2.56
TNFAIP2-209ENST00000560869 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
TNFAIP2-209ENST00000560869 YTHDC1Q96MU7 727 aaKnown RBP30.87■■■□□ 2.53
TNFAIP2-209ENST00000560869 UBTFP17480 764 aaKnown RBP30.8■■■□□ 2.52
TNFAIP2-209ENST00000560869 TRIM26Q12899 539 aaPredicted RBP30.79■■■□□ 2.52
TNFAIP2-209ENST00000560869 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
TNFAIP2-209ENST00000560869 ATP1B4Q9UN42 357 aaPredicted RBP30.51■■■□□ 2.48
TNFAIP2-209ENST00000560869 ABCC9O60706 1549 aa30.41■■■□□ 2.46
TNFAIP2-209ENST00000560869 ERICH6Q7L0X2 663 aa30.36■■■□□ 2.45
TNFAIP2-209ENST00000560869 NEFLP07196 543 aa30.13■■■□□ 2.41
TNFAIP2-209ENST00000560869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.11■■■□□ 2.41
TNFAIP2-209ENST00000560869 HNRNPUL2Q1KMD3 747 aaKnown RBP30.08■■■□□ 2.41
TNFAIP2-209ENST00000560869 PABPN1Q86U42 306 aaKnown RBP eCLIP30.03■■■□□ 2.4
TNFAIP2-209ENST00000560869 ITGAEP38570 1179 aa30.01■■■□□ 2.4
TNFAIP2-209ENST00000560869 MYT1Q01538 1121 aa29.95■■■□□ 2.38
TNFAIP2-209ENST00000560869 DIEXFQ68CQ4 756 aaKnown RBP29.84■■■□□ 2.37
TNFAIP2-209ENST00000560869 GTF3C3Q9Y5Q9 886 aa29.53■■■□□ 2.32
TNFAIP2-209ENST00000560869 CNGB1Q14028 1251 aaPredicted RBP29.53■■■□□ 2.32
TNFAIP2-209ENST00000560869 POLR3GLQ9BT43 218 aa29.47■■■□□ 2.31
TNFAIP2-209ENST00000560869 BCANQ96GW7 911 aa29.2■■■□□ 2.26
TNFAIP2-209ENST00000560869 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
TNFAIP2-209ENST00000560869 NEUROD1Q13562 356 aa29.07■■■□□ 2.24
TNFAIP2-209ENST00000560869 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
TNFAIP2-209ENST00000560869 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
TNFAIP2-209ENST00000560869 DAXXQ9UER7 740 aaPredicted RBP28.95■■■□□ 2.22
TNFAIP2-209ENST00000560869 MYT1LQ9UL68 1186 aa28.85■■■□□ 2.21
TNFAIP2-209ENST00000560869 SCRIBQ14160 1630 aa28.82■■■□□ 2.2
TNFAIP2-209ENST00000560869 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
TNFAIP2-209ENST00000560869 TRIM52Q96A61 297 aa28.75■■■□□ 2.19
TNFAIP2-209ENST00000560869 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
TNFAIP2-209ENST00000560869 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
TNFAIP2-209ENST00000560869 ANP32CO43423 234 aa28.68■■■□□ 2.18
TNFAIP2-209ENST00000560869 RTL5Q5HYW3 569 aaPredicted RBP28.66■■■□□ 2.18
TNFAIP2-209ENST00000560869 FBLN2P98095 1184 aa28.66■■■□□ 2.18
TNFAIP2-209ENST00000560869 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.18
TNFAIP2-209ENST00000560869 SCAF1Q9H7N4 1312 aaKnown RBP28.63■■■□□ 2.17
TNFAIP2-209ENST00000560869 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
TNFAIP2-209ENST00000560869 ZNF326Q5BKZ1 582 aaKnown RBP28.55■■■□□ 2.16
TNFAIP2-209ENST00000560869 P3H3Q8IVL6 736 aa28.52■■■□□ 2.16
TNFAIP2-209ENST00000560869 CLSPNQ9HAW4 1339 aa28.5■■■□□ 2.15
TNFAIP2-209ENST00000560869 CDK11AQ9UQ88 783 aaPredicted RBP28.49■■■□□ 2.15
TNFAIP2-209ENST00000560869 SLC4A1APQ9BWU0 796 aaKnown RBP28.47■■■□□ 2.15
TNFAIP2-209ENST00000560869 FKBP8Q14318 412 aa28.36■■■□□ 2.13
TNFAIP2-209ENST00000560869 ARID3CA6NKF2 412 aa28.31■■■□□ 2.12
TNFAIP2-209ENST00000560869 MIER1Q8N108 512 aa28.3■■■□□ 2.12
TNFAIP2-209ENST00000560869 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
TNFAIP2-209ENST00000560869 DDX10Q13206 875 aaKnown RBP28.29■■■□□ 2.12
TNFAIP2-209ENST00000560869 HNRNPUQ00839 825 aaKnown RBP eCLIP28.11■■■□□ 2.09
TNFAIP2-209ENST00000560869 HIRIP3Q9BW71 556 aaPredicted RBP28.04■■■□□ 2.08
TNFAIP2-209ENST00000560869 NACADO15069 1562 aa28.04■■■□□ 2.08
TNFAIP2-209ENST00000560869 NPM2Q86SE8 214 aaKnown RBP28.02■■■□□ 2.08
TNFAIP2-209ENST00000560869 FAM9BQ8IZU0 186 aa27.98■■■□□ 2.07
TNFAIP2-209ENST00000560869 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
TNFAIP2-209ENST00000560869 ANP32AP39687 249 aaKnown RBP27.94■■■□□ 2.06
TNFAIP2-209ENST00000560869 ZNF777Q9ULD5 760 aaPredicted RBP27.92■■■□□ 2.06
TNFAIP2-209ENST00000560869 BCL11AQ9H165 835 aa27.9■■■□□ 2.06
TNFAIP2-209ENST00000560869 IRX6P78412 446 aaPredicted RBP27.89■■■□□ 2.06
TNFAIP2-209ENST00000560869 SALL2Q9Y467 1007 aaPredicted RBP27.86■■■□□ 2.05
TNFAIP2-209ENST00000560869 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
TNFAIP2-209ENST00000560869 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
TNFAIP2-209ENST00000560869 CANXP27824 592 aaKnown RBP27.78■■■□□ 2.04
TNFAIP2-209ENST00000560869 CLIP1P30622 1438 aa27.73■■■□□ 2.03
TNFAIP2-209ENST00000560869 NBR1Q14596 966 aa27.71■■■□□ 2.03
TNFAIP2-209ENST00000560869 CEP162Q5TB80 1403 aa27.69■■■□□ 2.02
TNFAIP2-209ENST00000560869 MRS2Q9HD23 443 aa27.65■■■□□ 2.02
TNFAIP2-209ENST00000560869 CCDC136Q96JN2 1154 aa27.64■■■□□ 2.02
TNFAIP2-209ENST00000560869 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
TNFAIP2-209ENST00000560869 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
TNFAIP2-209ENST00000560869 SENP3-EIF4A1A0A087X0R7 540 aa27.58■■■□□ 2.01
TNFAIP2-209ENST00000560869 TMC1Q8TDI8 760 aa27.57■■■□□ 2
TNFAIP2-209ENST00000560869 EIF5BO60841 1220 aaKnown RBP27.56■■■□□ 2
TNFAIP2-209ENST00000560869 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
TNFAIP2-209ENST00000560869 ZBTB47Q9UFB7 747 aaPredicted RBP27.53■■■□□ 2
TNFAIP2-209ENST00000560869 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
TNFAIP2-209ENST00000560869 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
TNFAIP2-209ENST00000560869 RRP7BPQ9NSQ0 103 aa27.44■■□□□ 1.98
TNFAIP2-209ENST00000560869 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
TNFAIP2-209ENST00000560869 SUPT16HQ9Y5B9 1047 aaKnown RBP27.41■■□□□ 1.98
TNFAIP2-209ENST00000560869 SIN3AQ96ST3 1273 aa27.39■■□□□ 1.98
TNFAIP2-209ENST00000560869 SLC24A1O60721 1099 aa27.38■■□□□ 1.97
TNFAIP2-209ENST00000560869 GOLGA3Q08378 1498 aa27.38■■□□□ 1.97
TNFAIP2-209ENST00000560869 EIF4G2P78344 907 aaKnown RBP eCLIP27.38■■□□□ 1.97
TNFAIP2-209ENST00000560869 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
TNFAIP2-209ENST00000560869 TNIKQ9UKE5 1360 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms