Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 Metazoa_SRP.148-201ENST00000614489 291 ntBASIC8.8□□□□□ -1
P04436 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC8.8□□□□□ -1
P04436 AC004678.2-201ENST00000623695 1002 ntBASIC8.8□□□□□ -1
P04436 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC8.8□□□□□ -1
P04436 AC025268.1-201ENST00000632192 1199 ntBASIC8.8□□□□□ -1
P04436 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
P04436 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
P04436 CCDC190-201ENST00000367910 1498 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
P04436 PPP1R12BP1-201ENST00000367272 1671 ntBASIC8.8□□□□□ -1
P04436 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 ZBTB10-201ENST00000379091 2181 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
P04436 CAPN3-203ENST00000349748 2955 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04436 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC8.8□□□□□ -1
P04436 NLRP12-205ENST00000391775 3465 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
P04436 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC8.8□□□□□ -1
P04436 ZNF594-202ENST00000575779 4335 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
P04436 RFLNB-201ENST00000329099 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 NPAS3-205ENST00000547068 2531 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04436 AP002847.1-201ENST00000625136 2245 ntBASIC8.8□□□□□ -1
P04436 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 EPB41L2-216ENST00000527411 4186 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
P04436 PSMC1P10-201ENST00000434820 1327 ntBASIC8.8□□□□□ -1
P04436 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC8.8□□□□□ -1
P04436 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
P04436 AL133325.3-201ENST00000622757 3674 ntBASIC8.79□□□□□ -1
P04436 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
P04436 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
P04436 ZNF259P1-202ENST00000572422 4912 ntBASIC8.79□□□□□ -1
P04436 SH2D1A-202ENST00000371139 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC8.79□□□□□ -1
P04436 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 OAS2-203ENST00000449768 2072 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.79□□□□□ -1
P04436 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 ZNF135-203ENST00000401053 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 AC005165.1-201ENST00000446840 1870 ntTSL 2 BASIC8.79□□□□□ -1
P04436 LINC02067-201ENST00000473595 2845 ntTSL 2 BASIC8.79□□□□□ -1
P04436 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 LINC01837-205ENST00000635947 1557 ntTSL 5 BASIC8.79□□□□□ -1
P04436 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
P04436 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 NREP-203ENST00000395634 1468 ntTSL 2 BASIC8.79□□□□□ -1
P04436 EEF1A1P6-201ENST00000434005 1384 ntBASIC8.79□□□□□ -1
P04436 HNRNPKP1-201ENST00000510896 1379 ntBASIC8.79□□□□□ -1
P04436 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC8.79□□□□□ -1
P04436 LINC01890-201ENST00000415448 1017 ntTSL 2 BASIC8.79□□□□□ -1
P04436 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 AL109613.1-201ENST00000431770 722 ntTSL 2 BASIC8.79□□□□□ -1
P04436 ALDH7A1P2-201ENST00000456501 621 ntBASIC8.79□□□□□ -1
P04436 RPSAP36-201ENST00000465940 869 ntBASIC8.79□□□□□ -1
P04436 HSD17B7P2-201ENST00000471365 1033 ntBASIC8.79□□□□□ -1
P04436 RN7SL397P-201ENST00000487309 298 ntBASIC8.79□□□□□ -1
P04436 CREM-237ENST00000488328 1049 ntTSL 2 BASIC8.79□□□□□ -1
P04436 AC006499.7-201ENST00000512421 1117 ntBASIC8.79□□□□□ -1
P04436 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC8.79□□□□□ -1
P04436 IGLVI-38-201ENST00000519982 385 ntBASIC8.79□□□□□ -1
P04436 PRR5L-209ENST00000527487 740 ntTSL 3 BASIC8.79□□□□□ -1
P04436 TUBB4BP1-201ENST00000545422 178 ntBASIC8.79□□□□□ -1
P04436 IGKV2D-28-202ENST00000558026 306 ntBASIC8.79□□□□□ -1
P04436 AC080112.1-201ENST00000583752 487 ntBASIC8.79□□□□□ -1
P04436 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC8.79□□□□□ -1
P04436 LINC00649-212ENST00000601471 538 ntTSL 5 BASIC8.79□□□□□ -1
P04436 AL355376.2-202ENST00000604686 241 ntBASIC8.79□□□□□ -1
P04436 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC8.79□□□□□ -1
P04436 GPC5-204ENST00000618596 960 ntTSL 5 BASIC8.79□□□□□ -1
P04436 RDM1-229ENST00000639942 420 ntTSL 5 BASIC8.79□□□□□ -1
P04436 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC8.79□□□□□ -1
P04436 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC8.79□□□□□ -1
P04436 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC8.79□□□□□ -1
P04436 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.79□□□□□ -1
P04436 ATP8B5P-202ENST00000423138 2157 ntBASIC8.79□□□□□ -1
P04436 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
P04436 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC8.79□□□□□ -1
P04436 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
P04436 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC8.78□□□□□ -1
P04436 C1orf74-201ENST00000294811 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.78□□□□□ -1
P04436 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC8.78□□□□□ -1
P04436 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
P04436 CTH-203ENST00000411986 2044 ntTSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms