RNA–Protein interactions for RNA: ENST00000339437.10

TRNT1-203, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRNT1, Length 976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-203ENST00000339437 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
TRNT1-203ENST00000339437 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
TRNT1-203ENST00000339437 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
TRNT1-203ENST00000339437 ABCC9O60706 1549 aa22.1■■□□□ 1.13
TRNT1-203ENST00000339437 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
TRNT1-203ENST00000339437 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
TRNT1-203ENST00000339437 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
TRNT1-203ENST00000339437 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
TRNT1-203ENST00000339437 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
TRNT1-203ENST00000339437 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
TRNT1-203ENST00000339437 NACADO15069 1562 aa20.68■□□□□ 0.9
TRNT1-203ENST00000339437 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
TRNT1-203ENST00000339437 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
TRNT1-203ENST00000339437 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRNT1-203ENST00000339437 FOXD1Q16676 465 aa20.43■□□□□ 0.86
TRNT1-203ENST00000339437 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
TRNT1-203ENST00000339437 MYO15BQ96JP2 1530 aa20.33■□□□□ 0.85
TRNT1-203ENST00000339437 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
TRNT1-203ENST00000339437 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
TRNT1-203ENST00000339437 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
TRNT1-203ENST00000339437 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
TRNT1-203ENST00000339437 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
TRNT1-203ENST00000339437 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
TRNT1-203ENST00000339437 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
TRNT1-203ENST00000339437 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
TRNT1-203ENST00000339437 MSH5O43196 834 aa19.71■□□□□ 0.75
TRNT1-203ENST00000339437 ADRA2BP18089 450 aa19.42■□□□□ 0.7
TRNT1-203ENST00000339437 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
TRNT1-203ENST00000339437 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
TRNT1-203ENST00000339437 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
TRNT1-203ENST00000339437 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
TRNT1-203ENST00000339437 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
TRNT1-203ENST00000339437 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
TRNT1-203ENST00000339437 NESP48681 1621 aa19■□□□□ 0.63
TRNT1-203ENST00000339437 HMGXB3Q12766 1538 aa19■□□□□ 0.63
TRNT1-203ENST00000339437 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
TRNT1-203ENST00000339437 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
TRNT1-203ENST00000339437 CUX2O14529 1486 aa18.96■□□□□ 0.63
TRNT1-203ENST00000339437 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
TRNT1-203ENST00000339437 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
TRNT1-203ENST00000339437 MROH2BQ7Z745 1585 aa18.88■□□□□ 0.61
TRNT1-203ENST00000339437 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
TRNT1-203ENST00000339437 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
TRNT1-203ENST00000339437 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
TRNT1-203ENST00000339437 LAMC3Q9Y6N6 1575 aa18.71■□□□□ 0.59
TRNT1-203ENST00000339437 WIZO95785 1651 aa18.66■□□□□ 0.58
TRNT1-203ENST00000339437 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
TRNT1-203ENST00000339437 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
TRNT1-203ENST00000339437 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
TRNT1-203ENST00000339437 WDR62O43379 1518 aa18.46■□□□□ 0.55
TRNT1-203ENST00000339437 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
TRNT1-203ENST00000339437 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
TRNT1-203ENST00000339437 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
TRNT1-203ENST00000339437 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
TRNT1-203ENST00000339437 CFTRP13569 1480 aa18.33■□□□□ 0.52
TRNT1-203ENST00000339437 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
TRNT1-203ENST00000339437 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
TRNT1-203ENST00000339437 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
TRNT1-203ENST00000339437 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.5
TRNT1-203ENST00000339437 ZNF608Q9ULD9 1512 aaPredicted RBP18.1■□□□□ 0.49
TRNT1-203ENST00000339437 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
TRNT1-203ENST00000339437 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
TRNT1-203ENST00000339437 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
TRNT1-203ENST00000339437 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
TRNT1-203ENST00000339437 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
TRNT1-203ENST00000339437 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
TRNT1-203ENST00000339437 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
TRNT1-203ENST00000339437 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
TRNT1-203ENST00000339437 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
TRNT1-203ENST00000339437 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
TRNT1-203ENST00000339437 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRNT1-203ENST00000339437 CHD1O14646 1710 aa17.86■□□□□ 0.45
TRNT1-203ENST00000339437 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
TRNT1-203ENST00000339437 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
TRNT1-203ENST00000339437 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
TRNT1-203ENST00000339437 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
TRNT1-203ENST00000339437 TDRD9Q8NDG6 1382 aaKnown RBP17.74■□□□□ 0.43
TRNT1-203ENST00000339437 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
TRNT1-203ENST00000339437 CUX1P39880 1505 aa17.73■□□□□ 0.43
TRNT1-203ENST00000339437 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
TRNT1-203ENST00000339437 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
TRNT1-203ENST00000339437 FBLN2P98095 1184 aa17.71■□□□□ 0.43
TRNT1-203ENST00000339437 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
TRNT1-203ENST00000339437 SOGA1O94964 1423 aa17.7■□□□□ 0.42
TRNT1-203ENST00000339437 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
TRNT1-203ENST00000339437 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
TRNT1-203ENST00000339437 MAPK8IP2Q13387 824 aaPredicted RBP17.65■□□□□ 0.42
TRNT1-203ENST00000339437 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
TRNT1-203ENST00000339437 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
TRNT1-203ENST00000339437 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
TRNT1-203ENST00000339437 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
TRNT1-203ENST00000339437 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
TRNT1-203ENST00000339437 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
TRNT1-203ENST00000339437 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
TRNT1-203ENST00000339437 ABCA5Q8WWZ7 1642 aa17.52■□□□□ 0.4
TRNT1-203ENST00000339437 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
TRNT1-203ENST00000339437 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
TRNT1-203ENST00000339437 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
TRNT1-203ENST00000339437 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
TRNT1-203ENST00000339437 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms