RNA–Protein interactions for RNA: ENST00000639942.1

RDM1-229, Transcript of RAD52 motif containing 1, humanhuman

TSL 5 BASIC

Gene RDM1, Length 420 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-229ENST00000639942 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
RDM1-229ENST00000639942 ABCC9O60706 1549 aa21.26■□□□□ 0.99
RDM1-229ENST00000639942 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
RDM1-229ENST00000639942 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
RDM1-229ENST00000639942 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
RDM1-229ENST00000639942 NACADO15069 1562 aa20.05■□□□□ 0.8
RDM1-229ENST00000639942 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
RDM1-229ENST00000639942 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
RDM1-229ENST00000639942 UNC13AQ9UPW8 1703 aa19.74■□□□□ 0.75
RDM1-229ENST00000639942 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
RDM1-229ENST00000639942 BICRAQ9NZM4 1560 aa19.58■□□□□ 0.73
RDM1-229ENST00000639942 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
RDM1-229ENST00000639942 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
RDM1-229ENST00000639942 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
RDM1-229ENST00000639942 SHROOM4Q9ULL8 1493 aa19.29■□□□□ 0.68
RDM1-229ENST00000639942 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
RDM1-229ENST00000639942 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
RDM1-229ENST00000639942 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
RDM1-229ENST00000639942 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
RDM1-229ENST00000639942 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
RDM1-229ENST00000639942 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
RDM1-229ENST00000639942 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
RDM1-229ENST00000639942 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
RDM1-229ENST00000639942 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
RDM1-229ENST00000639942 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
RDM1-229ENST00000639942 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
RDM1-229ENST00000639942 CUX2O14529 1486 aa18.3■□□□□ 0.52
RDM1-229ENST00000639942 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
RDM1-229ENST00000639942 NESP48681 1621 aa18.24■□□□□ 0.51
RDM1-229ENST00000639942 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
RDM1-229ENST00000639942 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
RDM1-229ENST00000639942 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
RDM1-229ENST00000639942 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
RDM1-229ENST00000639942 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
RDM1-229ENST00000639942 WIZO95785 1651 aa18■□□□□ 0.47
RDM1-229ENST00000639942 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
RDM1-229ENST00000639942 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
RDM1-229ENST00000639942 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
RDM1-229ENST00000639942 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
RDM1-229ENST00000639942 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
RDM1-229ENST00000639942 WDR62O43379 1518 aa17.77■□□□□ 0.44
RDM1-229ENST00000639942 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
RDM1-229ENST00000639942 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
RDM1-229ENST00000639942 CFTRP13569 1480 aa17.73■□□□□ 0.43
RDM1-229ENST00000639942 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
RDM1-229ENST00000639942 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
RDM1-229ENST00000639942 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
RDM1-229ENST00000639942 PRDM2Q13029 1718 aa17.56■□□□□ 0.4
RDM1-229ENST00000639942 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
RDM1-229ENST00000639942 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
RDM1-229ENST00000639942 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
RDM1-229ENST00000639942 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
RDM1-229ENST00000639942 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
RDM1-229ENST00000639942 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
RDM1-229ENST00000639942 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
RDM1-229ENST00000639942 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■□ 21.5
RDM1-229ENST00000639942 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
RDM1-229ENST00000639942 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
RDM1-229ENST00000639942 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
RDM1-229ENST00000639942 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
RDM1-229ENST00000639942 FBLN2P98095 1184 aa17.23■□□□□ 0.35
RDM1-229ENST00000639942 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
RDM1-229ENST00000639942 SOGA1O94964 1423 aa17.2■□□□□ 0.34
RDM1-229ENST00000639942 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
RDM1-229ENST00000639942 CHD1O14646 1710 aa17.18■□□□□ 0.34
RDM1-229ENST00000639942 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
RDM1-229ENST00000639942 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
RDM1-229ENST00000639942 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
RDM1-229ENST00000639942 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
RDM1-229ENST00000639942 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
RDM1-229ENST00000639942 CUX1P39880 1505 aa17.1■□□□□ 0.33
RDM1-229ENST00000639942 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
RDM1-229ENST00000639942 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
RDM1-229ENST00000639942 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
RDM1-229ENST00000639942 GRIN2BQ13224 1484 aa17.03■□□□□ 0.32
RDM1-229ENST00000639942 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
RDM1-229ENST00000639942 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
RDM1-229ENST00000639942 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
RDM1-229ENST00000639942 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
RDM1-229ENST00000639942 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
RDM1-229ENST00000639942 SYNJ2O15056 1496 aa16.96■□□□□ 0.31
RDM1-229ENST00000639942 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
RDM1-229ENST00000639942 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
RDM1-229ENST00000639942 ABCA10Q8WWZ4 1543 aa16.92■□□□□ 0.3
RDM1-229ENST00000639942 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
RDM1-229ENST00000639942 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
RDM1-229ENST00000639942 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
RDM1-229ENST00000639942 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
RDM1-229ENST00000639942 GRIN2AQ12879 1464 aa16.79■□□□□ 0.28
RDM1-229ENST00000639942 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
RDM1-229ENST00000639942 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
RDM1-229ENST00000639942 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
RDM1-229ENST00000639942 NUP160Q12769 1436 aa16.71■□□□□ 0.27
RDM1-229ENST00000639942 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
RDM1-229ENST00000639942 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
RDM1-229ENST00000639942 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
RDM1-229ENST00000639942 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
RDM1-229ENST00000639942 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
RDM1-229ENST00000639942 AEBP2Q6ZN18 517 aaPredicted RBP16.53■□□□□ 0.24
RDM1-229ENST00000639942 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms