RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
CD109-202ENST00000422508 MYT1Q01538 1121 aa14.94□□□□□ -0.02
CD109-202ENST00000422508 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
CD109-202ENST00000422508 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
CD109-202ENST00000422508 FAM9AQ8IZU1 332 aaPredicted RBP14.42□□□□□ -0.1
CD109-202ENST00000422508 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
CD109-202ENST00000422508 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
CD109-202ENST00000422508 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
CD109-202ENST00000422508 APLP2Q06481 763 aa14.31□□□□□ -0.12
CD109-202ENST00000422508 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
CD109-202ENST00000422508 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
CD109-202ENST00000422508 NEFLP07196 543 aa14.03□□□□□ -0.16
CD109-202ENST00000422508 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
CD109-202ENST00000422508 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
CD109-202ENST00000422508 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
CD109-202ENST00000422508 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
CD109-202ENST00000422508 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
CD109-202ENST00000422508 RTL5Q5HYW3 569 aaPredicted RBP13.49□□□□□ -0.25
CD109-202ENST00000422508 ZNF316A6NFI3 1004 aaPredicted RBP13.42□□□□□ -0.26
CD109-202ENST00000422508 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
CD109-202ENST00000422508 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
CD109-202ENST00000422508 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
CD109-202ENST00000422508 UBTFP17480 764 aaKnown RBP13.21□□□□□ -0.29
CD109-202ENST00000422508 GLIPR1L2Q4G1C9 344 aa13.2□□□□□ -0.3
CD109-202ENST00000422508 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
CD109-202ENST00000422508 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
CD109-202ENST00000422508 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
CD109-202ENST00000422508 NEFMP07197 916 aa13.06□□□□□ -0.32
CD109-202ENST00000422508 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
CD109-202ENST00000422508 ANP32BQ92688 251 aaKnown RBP13.05□□□□□ -0.32
CD109-202ENST00000422508 HRCP23327 699 aa12.97□□□□□ -0.33
CD109-202ENST00000422508 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
CD109-202ENST00000422508 ANP32AP39687 249 aaKnown RBP12.9□□□□□ -0.34
CD109-202ENST00000422508 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
CD109-202ENST00000422508 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
CD109-202ENST00000422508 ANP32CO43423 234 aa12.78□□□□□ -0.36
CD109-202ENST00000422508 UPF2Q9HAU5 1272 aaKnown RBP12.77□□□□□ -0.36
CD109-202ENST00000422508 POLR3GLQ9BT43 218 aa12.77□□□□□ -0.36
CD109-202ENST00000422508 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
CD109-202ENST00000422508 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CD109-202ENST00000422508 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
CD109-202ENST00000422508 ANP32EQ9BTT0 268 aa12.72□□□□□ -0.37
CD109-202ENST00000422508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
CD109-202ENST00000422508 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
CD109-202ENST00000422508 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
CD109-202ENST00000422508 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
CD109-202ENST00000422508 ACIN1Q9UKV3 1341 aaKnown RBP12.61□□□□□ -0.39
CD109-202ENST00000422508 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
CD109-202ENST00000422508 ITGAEP38570 1179 aa12.56□□□□□ -0.4
CD109-202ENST00000422508 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
CD109-202ENST00000422508 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
CD109-202ENST00000422508 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
CD109-202ENST00000422508 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
CD109-202ENST00000422508 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
CD109-202ENST00000422508 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
CD109-202ENST00000422508 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
CD109-202ENST00000422508 BECN1Q14457 450 aa12.45□□□□□ -0.42
CD109-202ENST00000422508 TRIM52Q96A61 297 aa12.44□□□□□ -0.42
CD109-202ENST00000422508 GOLGA6L22H0YM25 854 aa12.43□□□□□ -0.42
CD109-202ENST00000422508 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
CD109-202ENST00000422508 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
CD109-202ENST00000422508 GOLGA6L6A8MZA4 724 aa12.37□□□□□ -0.43
CD109-202ENST00000422508 PPARGC1BQ86YN6 1023 aaKnown RBP12.34□□□□□ -0.43
CD109-202ENST00000422508 SLC24A1O60721 1099 aa12.33□□□□□ -0.44
CD109-202ENST00000422508 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
CD109-202ENST00000422508 NRDCO43847 1150 aa12.32□□□□□ -0.44
CD109-202ENST00000422508 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
CD109-202ENST00000422508 L1TD1Q5T7N2 865 aaKnown RBP12.31□□□□□ -0.44
CD109-202ENST00000422508 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
CD109-202ENST00000422508 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
CD109-202ENST00000422508 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
CD109-202ENST00000422508 CNGB1Q14028 1251 aaPredicted RBP12.29□□□□□ -0.44
CD109-202ENST00000422508 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
CD109-202ENST00000422508 BCANQ96GW7 911 aa12.27□□□□□ -0.44
CD109-202ENST00000422508 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
CD109-202ENST00000422508 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
CD109-202ENST00000422508 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
CD109-202ENST00000422508 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
CD109-202ENST00000422508 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
CD109-202ENST00000422508 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
CD109-202ENST00000422508 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
CD109-202ENST00000422508 PTMSP20962 102 aa12.22□□□□□ -0.45
CD109-202ENST00000422508 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
CD109-202ENST00000422508 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
CD109-202ENST00000422508 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
CD109-202ENST00000422508 WDR43Q15061 677 aaKnown RBP eCLIP12.18□□□□□ -0.46
CD109-202ENST00000422508 PTMAP06454 111 aaKnown RBP12.15□□□□□ -0.46
CD109-202ENST00000422508 FKBP8Q14318 412 aa12.14□□□□□ -0.47
CD109-202ENST00000422508 TMC1Q8TDI8 760 aa12.14□□□□□ -0.47
CD109-202ENST00000422508 LOC105371045A0A1W2PR82 267 aa12.13□□□□□ -0.47
CD109-202ENST00000422508 DNTTIP2Q5QJE6 756 aaKnown RBP12.13□□□□□ -0.47
CD109-202ENST00000422508 HNRNPUQ00839 825 aaKnown RBP eCLIP12.11□□□□□ -0.47
CD109-202ENST00000422508 MS4A1P11836 297 aa12.11□□□□□ -0.47
CD109-202ENST00000422508 CDCA8Q53HL2 280 aa12.09□□□□□ -0.47
CD109-202ENST00000422508 NBR1Q14596 966 aa12.08□□□□□ -0.48
CD109-202ENST00000422508 EEA1Q15075 1411 aa12.03□□□□□ -0.48
CD109-202ENST00000422508 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
CD109-202ENST00000422508 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
CD109-202ENST00000422508 STAG3Q9UJ98 1225 aa12.03□□□□□ -0.48
CD109-202ENST00000422508 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms