RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
IGKV2D-28-202ENST00000558026 ABCC9O60706 1549 aa24.3■■□□□ 1.48
IGKV2D-28-202ENST00000558026 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
IGKV2D-28-202ENST00000558026 CCDC180Q9P1Z9 1646 aa23.23■■□□□ 1.31
IGKV2D-28-202ENST00000558026 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
IGKV2D-28-202ENST00000558026 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
IGKV2D-28-202ENST00000558026 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
IGKV2D-28-202ENST00000558026 NACADO15069 1562 aa22.19■■□□□ 1.14
IGKV2D-28-202ENST00000558026 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
IGKV2D-28-202ENST00000558026 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
IGKV2D-28-202ENST00000558026 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
IGKV2D-28-202ENST00000558026 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
IGKV2D-28-202ENST00000558026 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
IGKV2D-28-202ENST00000558026 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
IGKV2D-28-202ENST00000558026 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
IGKV2D-28-202ENST00000558026 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
IGKV2D-28-202ENST00000558026 CUX2O14529 1486 aa21.25■□□□□ 0.99
IGKV2D-28-202ENST00000558026 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
IGKV2D-28-202ENST00000558026 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
IGKV2D-28-202ENST00000558026 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
IGKV2D-28-202ENST00000558026 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
IGKV2D-28-202ENST00000558026 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
IGKV2D-28-202ENST00000558026 NESP48681 1621 aa20.63■□□□□ 0.89
IGKV2D-28-202ENST00000558026 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
IGKV2D-28-202ENST00000558026 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
IGKV2D-28-202ENST00000558026 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
IGKV2D-28-202ENST00000558026 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
IGKV2D-28-202ENST00000558026 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
IGKV2D-28-202ENST00000558026 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
IGKV2D-28-202ENST00000558026 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
IGKV2D-28-202ENST00000558026 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
IGKV2D-28-202ENST00000558026 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
IGKV2D-28-202ENST00000558026 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
IGKV2D-28-202ENST00000558026 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
IGKV2D-28-202ENST00000558026 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
IGKV2D-28-202ENST00000558026 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
IGKV2D-28-202ENST00000558026 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
IGKV2D-28-202ENST00000558026 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
IGKV2D-28-202ENST00000558026 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
IGKV2D-28-202ENST00000558026 WDR62O43379 1518 aa20.02■□□□□ 0.79
IGKV2D-28-202ENST00000558026 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
IGKV2D-28-202ENST00000558026 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
IGKV2D-28-202ENST00000558026 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
IGKV2D-28-202ENST00000558026 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
IGKV2D-28-202ENST00000558026 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
IGKV2D-28-202ENST00000558026 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
IGKV2D-28-202ENST00000558026 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
IGKV2D-28-202ENST00000558026 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
IGKV2D-28-202ENST00000558026 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
IGKV2D-28-202ENST00000558026 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
IGKV2D-28-202ENST00000558026 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
IGKV2D-28-202ENST00000558026 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
IGKV2D-28-202ENST00000558026 CFTRP13569 1480 aa19.42■□□□□ 0.7
IGKV2D-28-202ENST00000558026 CHD1O14646 1710 aa19.42■□□□□ 0.7
IGKV2D-28-202ENST00000558026 WIZO95785 1651 aa19.4■□□□□ 0.7
IGKV2D-28-202ENST00000558026 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
IGKV2D-28-202ENST00000558026 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
IGKV2D-28-202ENST00000558026 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
IGKV2D-28-202ENST00000558026 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
IGKV2D-28-202ENST00000558026 FBLN2P98095 1184 aa19.29■□□□□ 0.68
IGKV2D-28-202ENST00000558026 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.67
IGKV2D-28-202ENST00000558026 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
IGKV2D-28-202ENST00000558026 PRDM2Q13029 1718 aa19.15■□□□□ 0.66
IGKV2D-28-202ENST00000558026 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
IGKV2D-28-202ENST00000558026 TARBP1Q13395 1621 aaKnown RBP19.1■□□□□ 0.65
IGKV2D-28-202ENST00000558026 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
IGKV2D-28-202ENST00000558026 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
IGKV2D-28-202ENST00000558026 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
IGKV2D-28-202ENST00000558026 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
IGKV2D-28-202ENST00000558026 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
IGKV2D-28-202ENST00000558026 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
IGKV2D-28-202ENST00000558026 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
IGKV2D-28-202ENST00000558026 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
IGKV2D-28-202ENST00000558026 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
IGKV2D-28-202ENST00000558026 KDM4FA0A1W2PPD8 638 aa18.93■□□□□ 0.62
IGKV2D-28-202ENST00000558026 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
IGKV2D-28-202ENST00000558026 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
IGKV2D-28-202ENST00000558026 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
IGKV2D-28-202ENST00000558026 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
IGKV2D-28-202ENST00000558026 MAGI1Q96QZ7 1491 aaPredicted RBP18.82■□□□□ 0.6
IGKV2D-28-202ENST00000558026 SOGA1O94964 1423 aa18.81■□□□□ 0.6
IGKV2D-28-202ENST00000558026 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
IGKV2D-28-202ENST00000558026 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
IGKV2D-28-202ENST00000558026 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
IGKV2D-28-202ENST00000558026 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
IGKV2D-28-202ENST00000558026 CEP170Q5SW79 1584 aa18.64■□□□□ 0.58
IGKV2D-28-202ENST00000558026 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
IGKV2D-28-202ENST00000558026 FAM69CQ0P6D2 419 aa18.64■□□□□ 0.57
IGKV2D-28-202ENST00000558026 KDM6BO15054 1643 aa18.63■□□□□ 0.57
IGKV2D-28-202ENST00000558026 HECW2Q9P2P5 1572 aa18.59■□□□□ 0.57
IGKV2D-28-202ENST00000558026 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.57
IGKV2D-28-202ENST00000558026 DIP2BQ9P265 1576 aa18.54■□□□□ 0.56
IGKV2D-28-202ENST00000558026 TSPOAP1O95153 1857 aa18.53■□□□□ 0.56
IGKV2D-28-202ENST00000558026 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
IGKV2D-28-202ENST00000558026 CUX1P39880 1505 aa18.52■□□□□ 0.56
IGKV2D-28-202ENST00000558026 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
IGKV2D-28-202ENST00000558026 GRIN2AQ12879 1464 aa18.52■□□□□ 0.55
IGKV2D-28-202ENST00000558026 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
IGKV2D-28-202ENST00000558026 NUP160Q12769 1436 aa18.48■□□□□ 0.55
IGKV2D-28-202ENST00000558026 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms