RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
TRERF1-203ENST00000372917 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
TRERF1-203ENST00000372917 MYT1Q01538 1121 aa18.45■□□□□ 0.54
TRERF1-203ENST00000372917 HRCP23327 699 aa18.02■□□□□ 0.47
TRERF1-203ENST00000372917 PPARGC1BQ86YN6 1023 aaKnown RBP17.79■□□□□ 0.44
TRERF1-203ENST00000372917 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
TRERF1-203ENST00000372917 TTBK1Q5TCY1 1321 aaPredicted RBP17.52■□□□□ 0.39
TRERF1-203ENST00000372917 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
TRERF1-203ENST00000372917 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
TRERF1-203ENST00000372917 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
TRERF1-203ENST00000372917 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
TRERF1-203ENST00000372917 GTF3C3Q9Y5Q9 886 aa16.94■□□□□ 0.3
TRERF1-203ENST00000372917 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
TRERF1-203ENST00000372917 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
TRERF1-203ENST00000372917 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
TRERF1-203ENST00000372917 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
TRERF1-203ENST00000372917 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
TRERF1-203ENST00000372917 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
TRERF1-203ENST00000372917 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
TRERF1-203ENST00000372917 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
TRERF1-203ENST00000372917 APLP2Q06481 763 aa16.61■□□□□ 0.25
TRERF1-203ENST00000372917 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
TRERF1-203ENST00000372917 CSRNP3Q8WYN3 585 aa16.43■□□□□ 0.22
TRERF1-203ENST00000372917 MYO15BQ96JP2 1530 aa16.42■□□□□ 0.22
TRERF1-203ENST00000372917 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
TRERF1-203ENST00000372917 YTHDC1Q96MU7 727 aaKnown RBP16.25■□□□□ 0.19
TRERF1-203ENST00000372917 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
TRERF1-203ENST00000372917 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
TRERF1-203ENST00000372917 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
TRERF1-203ENST00000372917 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
TRERF1-203ENST00000372917 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
TRERF1-203ENST00000372917 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
TRERF1-203ENST00000372917 CCDC180Q9P1Z9 1646 aa16■□□□□ 0.15
TRERF1-203ENST00000372917 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
TRERF1-203ENST00000372917 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
TRERF1-203ENST00000372917 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
TRERF1-203ENST00000372917 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
TRERF1-203ENST00000372917 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
TRERF1-203ENST00000372917 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
TRERF1-203ENST00000372917 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
TRERF1-203ENST00000372917 SUPT16HQ9Y5B9 1047 aaKnown RBP15.77■□□□□ 0.12
TRERF1-203ENST00000372917 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
TRERF1-203ENST00000372917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
TRERF1-203ENST00000372917 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
TRERF1-203ENST00000372917 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.63■□□□□ 0.09
TRERF1-203ENST00000372917 MIER1Q8N108 512 aa15.63■□□□□ 0.09
TRERF1-203ENST00000372917 DAXXQ9UER7 740 aaPredicted RBP15.6■□□□□ 0.09
TRERF1-203ENST00000372917 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
TRERF1-203ENST00000372917 BCANQ96GW7 911 aa15.58■□□□□ 0.09
TRERF1-203ENST00000372917 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
TRERF1-203ENST00000372917 PKNOX2Q96KN3 472 aa15.55■□□□□ 0.08
TRERF1-203ENST00000372917 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
TRERF1-203ENST00000372917 RBM19Q9Y4C8 960 aaKnown RBP15.54■□□□□ 0.08
TRERF1-203ENST00000372917 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
TRERF1-203ENST00000372917 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
TRERF1-203ENST00000372917 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
TRERF1-203ENST00000372917 MSH5O43196 834 aa15.44■□□□□ 0.06
TRERF1-203ENST00000372917 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
TRERF1-203ENST00000372917 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
TRERF1-203ENST00000372917 IL27Q8NEV9 243 aa15.29■□□□□ 0.04
TRERF1-203ENST00000372917 FKBP8Q14318 412 aa15.28■□□□□ 0.04
TRERF1-203ENST00000372917 NBR1Q14596 966 aa15.28■□□□□ 0.04
TRERF1-203ENST00000372917 ITGAEP38570 1179 aa15.27■□□□□ 0.04
TRERF1-203ENST00000372917 NEFLP07196 543 aa15.17■□□□□ 0.02
TRERF1-203ENST00000372917 FANCIQ9NVI1 1328 aa15.12■□□□□ 0.01
TRERF1-203ENST00000372917 ABCC9O60706 1549 aa15.12■□□□□ 0.01
TRERF1-203ENST00000372917 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
TRERF1-203ENST00000372917 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0.01
TRERF1-203ENST00000372917 GLIPR1L2Q4G1C9 344 aa15.06■□□□□ 0
TRERF1-203ENST00000372917 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
TRERF1-203ENST00000372917 A0A0U1RQG5 324 aaPredicted RBP15.04■□□□□ -0
TRERF1-203ENST00000372917 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
TRERF1-203ENST00000372917 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
TRERF1-203ENST00000372917 ZMYND15Q9H091 742 aa15.01□□□□□ -0.01
TRERF1-203ENST00000372917 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
TRERF1-203ENST00000372917 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.02
TRERF1-203ENST00000372917 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
TRERF1-203ENST00000372917 PDE4CQ08493 712 aa14.87□□□□□ -0.03
TRERF1-203ENST00000372917 PAK3O75914 559 aaPredicted RBP14.86□□□□□ -0.03
TRERF1-203ENST00000372917 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
TRERF1-203ENST00000372917 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
TRERF1-203ENST00000372917 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
TRERF1-203ENST00000372917 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
TRERF1-203ENST00000372917 BRPF3Q9ULD4 1205 aa14.79□□□□□ -0.04
TRERF1-203ENST00000372917 RSPH6AQ9H0K4 717 aa14.78□□□□□ -0.04
TRERF1-203ENST00000372917 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
TRERF1-203ENST00000372917 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.05
TRERF1-203ENST00000372917 RBM10P98175 930 aaKnown RBP14.75□□□□□ -0.05
TRERF1-203ENST00000372917 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
TRERF1-203ENST00000372917 FGD1P98174 961 aa14.73□□□□□ -0.05
TRERF1-203ENST00000372917 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
TRERF1-203ENST00000372917 BCL11BQ9C0K0 894 aaPredicted RBP14.71□□□□□ -0.05
TRERF1-203ENST00000372917 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.06
TRERF1-203ENST00000372917 NEFMP07197 916 aa14.7□□□□□ -0.06
TRERF1-203ENST00000372917 AAMPQ13685 434 aa14.67□□□□□ -0.06
TRERF1-203ENST00000372917 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
TRERF1-203ENST00000372917 LAS1LQ9Y4W2 734 aaKnown RBP14.62□□□□□ -0.07
TRERF1-203ENST00000372917 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
TRERF1-203ENST00000372917 HSP90AA2PQ14568 343 aaPredicted RBP14.6□□□□□ -0.07
TRERF1-203ENST00000372917 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms