RNA–Protein interactions for RNA: ENST00000413941.1

AL390835.1-201, humanhuman

TSL 5 BASIC

Gene AL390835.1, Length 901 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390835.1-201ENST00000413941 AEBP2Q6ZN18 517 aaPredicted RBP30.14■■■□□ 2.42
AL390835.1-201ENST00000413941 CHIC1Q5VXU3 224 aa29.98■■■□□ 2.39
AL390835.1-201ENST00000413941 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
AL390835.1-201ENST00000413941 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
AL390835.1-201ENST00000413941 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
AL390835.1-201ENST00000413941 FOXD1Q16676 465 aa23.56■■□□□ 1.36
AL390835.1-201ENST00000413941 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
AL390835.1-201ENST00000413941 ADRA2BP18089 450 aa23.09■■□□□ 1.29
AL390835.1-201ENST00000413941 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
AL390835.1-201ENST00000413941 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
AL390835.1-201ENST00000413941 KCNA4P22459 653 aa21.86■■□□□ 1.09
AL390835.1-201ENST00000413941 PPP4R3CPQ6ZMV5 832 aa21.71■■□□□ 1.07
AL390835.1-201ENST00000413941 MSH5O43196 834 aa21.46■■□□□ 1.03
AL390835.1-201ENST00000413941 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
AL390835.1-201ENST00000413941 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
AL390835.1-201ENST00000413941 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
AL390835.1-201ENST00000413941 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
AL390835.1-201ENST00000413941 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
AL390835.1-201ENST00000413941 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
AL390835.1-201ENST00000413941 MAPK8IP2Q13387 824 aaPredicted RBP20.8■□□□□ 0.92
AL390835.1-201ENST00000413941 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
AL390835.1-201ENST00000413941 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
AL390835.1-201ENST00000413941 RNF216Q9NWF9 866 aaPredicted RBP20.45■□□□□ 0.86
AL390835.1-201ENST00000413941 DMRT2Q9Y5R5 561 aa20.42■□□□□ 0.86
AL390835.1-201ENST00000413941 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
AL390835.1-201ENST00000413941 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
AL390835.1-201ENST00000413941 ZBTB22O15209 634 aa20.16■□□□□ 0.82
AL390835.1-201ENST00000413941 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
AL390835.1-201ENST00000413941 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
AL390835.1-201ENST00000413941 ABCC9O60706 1549 aa19.57■□□□□ 0.72
AL390835.1-201ENST00000413941 MYCNP04198 464 aaPredicted RBP19.37■□□□□ 0.69
AL390835.1-201ENST00000413941 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
AL390835.1-201ENST00000413941 ATXN8OSP0DMR3 200 aa19.23■□□□□ 0.67
AL390835.1-201ENST00000413941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
AL390835.1-201ENST00000413941 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
AL390835.1-201ENST00000413941 NACADO15069 1562 aa19.11■□□□□ 0.65
AL390835.1-201ENST00000413941 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
AL390835.1-201ENST00000413941 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
AL390835.1-201ENST00000413941 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
AL390835.1-201ENST00000413941 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
AL390835.1-201ENST00000413941 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
AL390835.1-201ENST00000413941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
AL390835.1-201ENST00000413941 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
AL390835.1-201ENST00000413941 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
AL390835.1-201ENST00000413941 ATF5Q9Y2D1 282 aaPredicted RBP18.85■□□□□ 0.61
AL390835.1-201ENST00000413941 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
AL390835.1-201ENST00000413941 APLP2Q06481 763 aa18.54■□□□□ 0.56
AL390835.1-201ENST00000413941 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
AL390835.1-201ENST00000413941 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
AL390835.1-201ENST00000413941 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
AL390835.1-201ENST00000413941 FKBP8Q14318 412 aa18.41■□□□□ 0.54
AL390835.1-201ENST00000413941 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
AL390835.1-201ENST00000413941 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
AL390835.1-201ENST00000413941 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
AL390835.1-201ENST00000413941 C1QBPQ07021 282 aaKnown RBP18.28■□□□□ 0.52
AL390835.1-201ENST00000413941 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
AL390835.1-201ENST00000413941 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
AL390835.1-201ENST00000413941 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
AL390835.1-201ENST00000413941 CAPN15O75808 1086 aa18.11■□□□□ 0.49
AL390835.1-201ENST00000413941 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
AL390835.1-201ENST00000413941 POLA2Q14181 598 aa18.05■□□□□ 0.48
AL390835.1-201ENST00000413941 FBLN2P98095 1184 aa17.92■□□□□ 0.46
AL390835.1-201ENST00000413941 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
AL390835.1-201ENST00000413941 SPDYE4A6NLX3 237 aa17.87■□□□□ 0.45
AL390835.1-201ENST00000413941 ABCB7O75027 752 aa17.83■□□□□ 0.44
AL390835.1-201ENST00000413941 PROM2Q8N271 834 aa17.8■□□□□ 0.44
AL390835.1-201ENST00000413941 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
AL390835.1-201ENST00000413941 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
AL390835.1-201ENST00000413941 DSG3P32926 999 aa17.78■□□□□ 0.44
AL390835.1-201ENST00000413941 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
AL390835.1-201ENST00000413941 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
AL390835.1-201ENST00000413941 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
AL390835.1-201ENST00000413941 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
AL390835.1-201ENST00000413941 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
AL390835.1-201ENST00000413941 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
AL390835.1-201ENST00000413941 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
AL390835.1-201ENST00000413941 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
AL390835.1-201ENST00000413941 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
AL390835.1-201ENST00000413941 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
AL390835.1-201ENST00000413941 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
AL390835.1-201ENST00000413941 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
AL390835.1-201ENST00000413941 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
AL390835.1-201ENST00000413941 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
AL390835.1-201ENST00000413941 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
AL390835.1-201ENST00000413941 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
AL390835.1-201ENST00000413941 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
AL390835.1-201ENST00000413941 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
AL390835.1-201ENST00000413941 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
AL390835.1-201ENST00000413941 VASPP50552 380 aaPredicted RBP17.37■□□□□ 0.37
AL390835.1-201ENST00000413941 SSUH2Q9Y2M2 353 aa17.37■□□□□ 0.37
AL390835.1-201ENST00000413941 ZNF692Q9BU19 519 aaPredicted RBP17.36■□□□□ 0.37
AL390835.1-201ENST00000413941 IFNLR1Q8IU57 520 aaPredicted RBP17.22■□□□□ 0.35
AL390835.1-201ENST00000413941 WIZO95785 1651 aa17.2■□□□□ 0.34
AL390835.1-201ENST00000413941 TOP2AP11388 1531 aaKnown RBP17.2■□□□□ 0.34
AL390835.1-201ENST00000413941 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
AL390835.1-201ENST00000413941 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
AL390835.1-201ENST00000413941 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
AL390835.1-201ENST00000413941 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
AL390835.1-201ENST00000413941 CFTRP13569 1480 aa17.02■□□□□ 0.32
AL390835.1-201ENST00000413941 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms