RNA–Protein interactions for RNA: ENST00000632086.1

LINC01002-213, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5 BASIC

Gene LINC01002, Length 918 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-213ENST00000632086 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
LINC01002-213ENST00000632086 ABCC9O60706 1549 aa20.99■□□□□ 0.95
LINC01002-213ENST00000632086 CCDC180Q9P1Z9 1646 aa20.73■□□□□ 0.91
LINC01002-213ENST00000632086 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
LINC01002-213ENST00000632086 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
LINC01002-213ENST00000632086 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
LINC01002-213ENST00000632086 NACADO15069 1562 aa19.7■□□□□ 0.74
LINC01002-213ENST00000632086 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
LINC01002-213ENST00000632086 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
LINC01002-213ENST00000632086 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
LINC01002-213ENST00000632086 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
LINC01002-213ENST00000632086 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
LINC01002-213ENST00000632086 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
LINC01002-213ENST00000632086 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
LINC01002-213ENST00000632086 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
LINC01002-213ENST00000632086 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
LINC01002-213ENST00000632086 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.62
LINC01002-213ENST00000632086 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
LINC01002-213ENST00000632086 DNAJC5Q9H3Z4 198 aa18.29■□□□□ 0.52
LINC01002-213ENST00000632086 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
LINC01002-213ENST00000632086 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
LINC01002-213ENST00000632086 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
LINC01002-213ENST00000632086 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
LINC01002-213ENST00000632086 CUX2O14529 1486 aa18.06■□□□□ 0.48
LINC01002-213ENST00000632086 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
LINC01002-213ENST00000632086 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
LINC01002-213ENST00000632086 NESP48681 1621 aa17.98■□□□□ 0.47
LINC01002-213ENST00000632086 BAZ1AQ9NRL2 1556 aaPredicted RBP17.97■□□□□ 0.47
LINC01002-213ENST00000632086 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
LINC01002-213ENST00000632086 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
LINC01002-213ENST00000632086 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
LINC01002-213ENST00000632086 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
LINC01002-213ENST00000632086 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
LINC01002-213ENST00000632086 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
LINC01002-213ENST00000632086 CADPSQ9ULU8 1353 aa17.7■□□□□ 0.42
LINC01002-213ENST00000632086 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
LINC01002-213ENST00000632086 WIZO95785 1651 aa17.64■□□□□ 0.41
LINC01002-213ENST00000632086 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
LINC01002-213ENST00000632086 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
LINC01002-213ENST00000632086 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
LINC01002-213ENST00000632086 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
LINC01002-213ENST00000632086 WDR62O43379 1518 aa17.47■□□□□ 0.39
LINC01002-213ENST00000632086 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
LINC01002-213ENST00000632086 CFTRP13569 1480 aa17.43■□□□□ 0.38
LINC01002-213ENST00000632086 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
LINC01002-213ENST00000632086 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
LINC01002-213ENST00000632086 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
LINC01002-213ENST00000632086 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
LINC01002-213ENST00000632086 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
LINC01002-213ENST00000632086 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
LINC01002-213ENST00000632086 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
LINC01002-213ENST00000632086 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
LINC01002-213ENST00000632086 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
LINC01002-213ENST00000632086 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
LINC01002-213ENST00000632086 FBLN2P98095 1184 aa17.04■□□□□ 0.32
LINC01002-213ENST00000632086 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC01002-213ENST00000632086 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
LINC01002-213ENST00000632086 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
LINC01002-213ENST00000632086 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
LINC01002-213ENST00000632086 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
LINC01002-213ENST00000632086 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
LINC01002-213ENST00000632086 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
LINC01002-213ENST00000632086 ARHGEF11O15085 1522 aa16.96■□□□□ 0.3
LINC01002-213ENST00000632086 SOGA1O94964 1423 aa16.93■□□□□ 0.3
LINC01002-213ENST00000632086 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
LINC01002-213ENST00000632086 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
LINC01002-213ENST00000632086 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
LINC01002-213ENST00000632086 RAD54L2Q9Y4B4 1467 aa16.92■□□□□ 0.3
LINC01002-213ENST00000632086 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
LINC01002-213ENST00000632086 CHD1O14646 1710 aa16.87■□□□□ 0.29
LINC01002-213ENST00000632086 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
LINC01002-213ENST00000632086 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
LINC01002-213ENST00000632086 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
LINC01002-213ENST00000632086 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
LINC01002-213ENST00000632086 CUX1P39880 1505 aa16.76■□□□□ 0.27
LINC01002-213ENST00000632086 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
LINC01002-213ENST00000632086 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
LINC01002-213ENST00000632086 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
LINC01002-213ENST00000632086 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
LINC01002-213ENST00000632086 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
LINC01002-213ENST00000632086 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
LINC01002-213ENST00000632086 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
LINC01002-213ENST00000632086 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
LINC01002-213ENST00000632086 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
LINC01002-213ENST00000632086 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
LINC01002-213ENST00000632086 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
LINC01002-213ENST00000632086 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
LINC01002-213ENST00000632086 BIVM-ERCC5R4GMW8 1640 aa16.51■□□□□ 0.23
LINC01002-213ENST00000632086 GRIN2AQ12879 1464 aa16.5■□□□□ 0.23
LINC01002-213ENST00000632086 AEBP2Q6ZN18 517 aaPredicted RBP16.46■□□□□ 0.23
LINC01002-213ENST00000632086 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
LINC01002-213ENST00000632086 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
LINC01002-213ENST00000632086 NUP160Q12769 1436 aa16.43■□□□□ 0.22
LINC01002-213ENST00000632086 CEP170Q5SW79 1584 aa16.43■□□□□ 0.22
LINC01002-213ENST00000632086 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
LINC01002-213ENST00000632086 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
LINC01002-213ENST00000632086 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
LINC01002-213ENST00000632086 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
LINC01002-213ENST00000632086 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC01002-213ENST00000632086 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms