RNA–Protein interactions for RNA: ENST00000371139.8

SH2D1A-202, Transcript of SH2 domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D1A, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-202ENST00000371139 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
SH2D1A-202ENST00000371139 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
SH2D1A-202ENST00000371139 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
SH2D1A-202ENST00000371139 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
SH2D1A-202ENST00000371139 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
SH2D1A-202ENST00000371139 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
SH2D1A-202ENST00000371139 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
SH2D1A-202ENST00000371139 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
SH2D1A-202ENST00000371139 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
SH2D1A-202ENST00000371139 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
SH2D1A-202ENST00000371139 SCRIBQ14160 1630 aa17.12■□□□□ 0.33
SH2D1A-202ENST00000371139 ABCC9O60706 1549 aa17.11■□□□□ 0.33
SH2D1A-202ENST00000371139 NACADO15069 1562 aa17.06■□□□□ 0.32
SH2D1A-202ENST00000371139 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
SH2D1A-202ENST00000371139 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
SH2D1A-202ENST00000371139 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
SH2D1A-202ENST00000371139 PHF23Q9BUL5 403 aaPredicted RBP16.68■□□□□ 0.26
SH2D1A-202ENST00000371139 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
SH2D1A-202ENST00000371139 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
SH2D1A-202ENST00000371139 WIZO95785 1651 aa16.54■□□□□ 0.24
SH2D1A-202ENST00000371139 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
SH2D1A-202ENST00000371139 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
SH2D1A-202ENST00000371139 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
SH2D1A-202ENST00000371139 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
SH2D1A-202ENST00000371139 SMARCA4P51532 1647 aa16.4■□□□□ 0.22
SH2D1A-202ENST00000371139 BICRAQ9NZM4 1560 aa16.35■□□□□ 0.21
SH2D1A-202ENST00000371139 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
SH2D1A-202ENST00000371139 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
SH2D1A-202ENST00000371139 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
SH2D1A-202ENST00000371139 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
SH2D1A-202ENST00000371139 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
SH2D1A-202ENST00000371139 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
SH2D1A-202ENST00000371139 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
SH2D1A-202ENST00000371139 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
SH2D1A-202ENST00000371139 HRCP23327 699 aa16.14■□□□□ 0.17
SH2D1A-202ENST00000371139 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
SH2D1A-202ENST00000371139 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
SH2D1A-202ENST00000371139 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
SH2D1A-202ENST00000371139 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
SH2D1A-202ENST00000371139 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
SH2D1A-202ENST00000371139 SOGA1O94964 1423 aa15.9■□□□□ 0.14
SH2D1A-202ENST00000371139 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
SH2D1A-202ENST00000371139 EEA1Q15075 1411 aa15.86■□□□□ 0.13
SH2D1A-202ENST00000371139 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
SH2D1A-202ENST00000371139 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
SH2D1A-202ENST00000371139 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
SH2D1A-202ENST00000371139 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
SH2D1A-202ENST00000371139 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
SH2D1A-202ENST00000371139 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.11
SH2D1A-202ENST00000371139 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
SH2D1A-202ENST00000371139 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
SH2D1A-202ENST00000371139 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
SH2D1A-202ENST00000371139 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
SH2D1A-202ENST00000371139 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
SH2D1A-202ENST00000371139 KIF21BO75037 1637 aa15.64■□□□□ 0.09
SH2D1A-202ENST00000371139 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
SH2D1A-202ENST00000371139 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
SH2D1A-202ENST00000371139 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
SH2D1A-202ENST00000371139 CFTRP13569 1480 aa15.59■□□□□ 0.09
SH2D1A-202ENST00000371139 FOXD1Q16676 465 aa15.57■□□□□ 0.08
SH2D1A-202ENST00000371139 CUX1P39880 1505 aa15.54■□□□□ 0.08
SH2D1A-202ENST00000371139 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
SH2D1A-202ENST00000371139 CLIP1P30622 1438 aa15.49■□□□□ 0.07
SH2D1A-202ENST00000371139 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
SH2D1A-202ENST00000371139 TTBK1Q5TCY1 1321 aaPredicted RBP15.45■□□□□ 0.06
SH2D1A-202ENST00000371139 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
SH2D1A-202ENST00000371139 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
SH2D1A-202ENST00000371139 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
SH2D1A-202ENST00000371139 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
SH2D1A-202ENST00000371139 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SH2D1A-202ENST00000371139 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
SH2D1A-202ENST00000371139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
SH2D1A-202ENST00000371139 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
SH2D1A-202ENST00000371139 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
SH2D1A-202ENST00000371139 ARAP1Q96P48 1450 aa15.3■□□□□ 0.04
SH2D1A-202ENST00000371139 CUX2O14529 1486 aa15.28■□□□□ 0.04
SH2D1A-202ENST00000371139 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
SH2D1A-202ENST00000371139 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
SH2D1A-202ENST00000371139 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
SH2D1A-202ENST00000371139 IGF1RP08069 1367 aa15.25■□□□□ 0.03
SH2D1A-202ENST00000371139 APLP2Q06481 763 aa15.25■□□□□ 0.03
SH2D1A-202ENST00000371139 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
SH2D1A-202ENST00000371139 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
SH2D1A-202ENST00000371139 NESP48681 1621 aa15.19■□□□□ 0.02
SH2D1A-202ENST00000371139 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
SH2D1A-202ENST00000371139 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
SH2D1A-202ENST00000371139 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
SH2D1A-202ENST00000371139 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
SH2D1A-202ENST00000371139 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
SH2D1A-202ENST00000371139 LAMC3Q9Y6N6 1575 aa15.13■□□□□ 0.01
SH2D1A-202ENST00000371139 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
SH2D1A-202ENST00000371139 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
SH2D1A-202ENST00000371139 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
SH2D1A-202ENST00000371139 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
SH2D1A-202ENST00000371139 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
SH2D1A-202ENST00000371139 PDS5BQ9NTI5 1447 aa15.02□□□□□ -0.01
SH2D1A-202ENST00000371139 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
SH2D1A-202ENST00000371139 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
SH2D1A-202ENST00000371139 CUL7Q14999 1698 aa15.01□□□□□ -0.01
SH2D1A-202ENST00000371139 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms