RNA–Protein interactions for RNA: ENST00000242067.10

BBS9-201, Transcript of Bardet-Biedl syndrome 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BBS9, Length 4,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9-201ENST00000242067 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
BBS9-201ENST00000242067 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
BBS9-201ENST00000242067 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
BBS9-201ENST00000242067 HRCP23327 699 aa17.36■□□□□ 0.37
BBS9-201ENST00000242067 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
BBS9-201ENST00000242067 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
BBS9-201ENST00000242067 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
BBS9-201ENST00000242067 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
BBS9-201ENST00000242067 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
BBS9-201ENST00000242067 LOC105371045A0A1W2PR82 267 aa16.71■□□□□ 0.27
BBS9-201ENST00000242067 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
BBS9-201ENST00000242067 EHMT2Q96KQ7 1210 aa16.58■□□□□ 0.25
BBS9-201ENST00000242067 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
BBS9-201ENST00000242067 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
BBS9-201ENST00000242067 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
BBS9-201ENST00000242067 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
BBS9-201ENST00000242067 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
BBS9-201ENST00000242067 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
BBS9-201ENST00000242067 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
BBS9-201ENST00000242067 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
BBS9-201ENST00000242067 CENPBP07199 599 aaPredicted RBP16.13■□□□□ 0.17
BBS9-201ENST00000242067 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
BBS9-201ENST00000242067 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
BBS9-201ENST00000242067 MYT1Q01538 1121 aa16.1■□□□□ 0.17
BBS9-201ENST00000242067 TRIM41Q8WV44 630 aa16.09■□□□□ 0.17
BBS9-201ENST00000242067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
BBS9-201ENST00000242067 YTHDC1Q96MU7 727 aaKnown RBP16.08■□□□□ 0.16
BBS9-201ENST00000242067 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
BBS9-201ENST00000242067 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
BBS9-201ENST00000242067 ZCCHC6Q5VYS8 1495 aaKnown RBP15.89■□□□□ 0.13
BBS9-201ENST00000242067 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
BBS9-201ENST00000242067 MIER1Q8N108 512 aa15.51■□□□□ 0.07
BBS9-201ENST00000242067 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
BBS9-201ENST00000242067 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
BBS9-201ENST00000242067 RANGAP1P46060 587 aaPredicted RBP15.4■□□□□ 0.06
BBS9-201ENST00000242067 BCANQ96GW7 911 aa15.34■□□□□ 0.05
BBS9-201ENST00000242067 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
BBS9-201ENST00000242067 APLP2Q06481 763 aa15.27■□□□□ 0.04
BBS9-201ENST00000242067 BCL11AQ9H165 835 aa15.21■□□□□ 0.03
BBS9-201ENST00000242067 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
BBS9-201ENST00000242067 ANP32EQ9BTT0 268 aa15.19■□□□□ 0.02
BBS9-201ENST00000242067 RB1CC1Q8TDY2 1594 aa15.17■□□□□ 0.02
BBS9-201ENST00000242067 TSHZ2Q9NRE2 1034 aa15.12■□□□□ 0.01
BBS9-201ENST00000242067 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
BBS9-201ENST00000242067 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
BBS9-201ENST00000242067 NEFLP07196 543 aa15.07■□□□□ 0
BBS9-201ENST00000242067 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
BBS9-201ENST00000242067 CEP162Q5TB80 1403 aa15.06■□□□□ 0
BBS9-201ENST00000242067 ITGAEP38570 1179 aa15.05■□□□□ -0
BBS9-201ENST00000242067 FKBP8Q14318 412 aa15.05■□□□□ -0
BBS9-201ENST00000242067 ABCC9O60706 1549 aa15.04■□□□□ -0
BBS9-201ENST00000242067 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
BBS9-201ENST00000242067 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
BBS9-201ENST00000242067 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
BBS9-201ENST00000242067 SOGA1O94964 1423 aa14.89□□□□□ -0.03
BBS9-201ENST00000242067 TRIM52Q96A61 297 aa14.87□□□□□ -0.03
BBS9-201ENST00000242067 TNIKQ9UKE5 1360 aa14.86□□□□□ -0.03
BBS9-201ENST00000242067 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
BBS9-201ENST00000242067 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
BBS9-201ENST00000242067 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
BBS9-201ENST00000242067 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
BBS9-201ENST00000242067 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
BBS9-201ENST00000242067 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
BBS9-201ENST00000242067 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
BBS9-201ENST00000242067 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
BBS9-201ENST00000242067 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
BBS9-201ENST00000242067 CLIP1P30622 1438 aa14.73□□□□□ -0.05
BBS9-201ENST00000242067 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
BBS9-201ENST00000242067 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
BBS9-201ENST00000242067 WIZO95785 1651 aa14.69□□□□□ -0.06
BBS9-201ENST00000242067 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
BBS9-201ENST00000242067 ANP32CO43423 234 aa14.68□□□□□ -0.06
BBS9-201ENST00000242067 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
BBS9-201ENST00000242067 NBR1Q14596 966 aa14.63□□□□□ -0.07
BBS9-201ENST00000242067 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
BBS9-201ENST00000242067 CNGB1Q14028 1251 aaPredicted RBP14.6□□□□□ -0.07
BBS9-201ENST00000242067 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
BBS9-201ENST00000242067 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
BBS9-201ENST00000242067 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
BBS9-201ENST00000242067 MSH5O43196 834 aa14.58□□□□□ -0.08
BBS9-201ENST00000242067 EEA1Q15075 1411 aa14.57□□□□□ -0.08
BBS9-201ENST00000242067 VPS8Q8N3P4 1428 aa14.55□□□□□ -0.08
BBS9-201ENST00000242067 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
BBS9-201ENST00000242067 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
BBS9-201ENST00000242067 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
BBS9-201ENST00000242067 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
BBS9-201ENST00000242067 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
BBS9-201ENST00000242067 B4GALNT3Q6L9W6 998 aa14.44□□□□□ -0.1
BBS9-201ENST00000242067 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
BBS9-201ENST00000242067 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
BBS9-201ENST00000242067 SENP3-EIF4A1A0A087X0R7 540 aa14.41□□□□□ -0.1
BBS9-201ENST00000242067 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
BBS9-201ENST00000242067 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
BBS9-201ENST00000242067 P3H3Q8IVL6 736 aa14.39□□□□□ -0.11
BBS9-201ENST00000242067 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
BBS9-201ENST00000242067 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
BBS9-201ENST00000242067 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
BBS9-201ENST00000242067 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
BBS9-201ENST00000242067 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
BBS9-201ENST00000242067 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms