RNA–Protein interactions for RNA: ENST00000618596.1

GPC5-204, Transcript of glypican 5, humanhuman

TSL 5 BASIC

Gene GPC5, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-204ENST00000618596 NISCHQ9Y2I1 1504 aa22.42■■□□□ 1.18
GPC5-204ENST00000618596 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
GPC5-204ENST00000618596 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
GPC5-204ENST00000618596 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
GPC5-204ENST00000618596 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
GPC5-204ENST00000618596 ABCC9O60706 1549 aa18.74■□□□□ 0.59
GPC5-204ENST00000618596 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
GPC5-204ENST00000618596 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
GPC5-204ENST00000618596 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
GPC5-204ENST00000618596 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
GPC5-204ENST00000618596 NACADO15069 1562 aa18.34■□□□□ 0.53
GPC5-204ENST00000618596 RB1CC1Q8TDY2 1594 aa18.23■□□□□ 0.51
GPC5-204ENST00000618596 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
GPC5-204ENST00000618596 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
GPC5-204ENST00000618596 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
GPC5-204ENST00000618596 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
GPC5-204ENST00000618596 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
GPC5-204ENST00000618596 POTEDQ86YR6 584 aa17.64■□□□□ 0.41
GPC5-204ENST00000618596 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
GPC5-204ENST00000618596 FOXD1Q16676 465 aa17.49■□□□□ 0.39
GPC5-204ENST00000618596 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
GPC5-204ENST00000618596 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
GPC5-204ENST00000618596 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.37
GPC5-204ENST00000618596 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
GPC5-204ENST00000618596 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
GPC5-204ENST00000618596 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
GPC5-204ENST00000618596 WIZO95785 1651 aa17.19■□□□□ 0.34
GPC5-204ENST00000618596 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
GPC5-204ENST00000618596 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
GPC5-204ENST00000618596 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
GPC5-204ENST00000618596 SMARCA2P51531 1590 aa17.02■□□□□ 0.32
GPC5-204ENST00000618596 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
GPC5-204ENST00000618596 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.31
GPC5-204ENST00000618596 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
GPC5-204ENST00000618596 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
GPC5-204ENST00000618596 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
GPC5-204ENST00000618596 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
GPC5-204ENST00000618596 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
GPC5-204ENST00000618596 CFTRP13569 1480 aa16.49■□□□□ 0.23
GPC5-204ENST00000618596 MSH5O43196 834 aa16.48■□□□□ 0.23
GPC5-204ENST00000618596 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
GPC5-204ENST00000618596 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
GPC5-204ENST00000618596 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
GPC5-204ENST00000618596 NESP48681 1621 aa16.41■□□□□ 0.22
GPC5-204ENST00000618596 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
GPC5-204ENST00000618596 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
GPC5-204ENST00000618596 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
GPC5-204ENST00000618596 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
GPC5-204ENST00000618596 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
GPC5-204ENST00000618596 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
GPC5-204ENST00000618596 CUX1P39880 1505 aa16.23■□□□□ 0.19
GPC5-204ENST00000618596 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
GPC5-204ENST00000618596 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
GPC5-204ENST00000618596 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
GPC5-204ENST00000618596 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
GPC5-204ENST00000618596 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
GPC5-204ENST00000618596 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
GPC5-204ENST00000618596 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
GPC5-204ENST00000618596 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
GPC5-204ENST00000618596 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
GPC5-204ENST00000618596 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
GPC5-204ENST00000618596 SOGA1O94964 1423 aa16.04■□□□□ 0.16
GPC5-204ENST00000618596 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
GPC5-204ENST00000618596 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
GPC5-204ENST00000618596 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
GPC5-204ENST00000618596 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
GPC5-204ENST00000618596 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
GPC5-204ENST00000618596 WDR62O43379 1518 aa16■□□□□ 0.15
GPC5-204ENST00000618596 EEA1Q15075 1411 aa15.97■□□□□ 0.15
GPC5-204ENST00000618596 RAD54L2Q9Y4B4 1467 aa15.96■□□□□ 0.14
GPC5-204ENST00000618596 CUX2O14529 1486 aa15.93■□□□□ 0.14
GPC5-204ENST00000618596 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
GPC5-204ENST00000618596 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
GPC5-204ENST00000618596 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
GPC5-204ENST00000618596 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.13
GPC5-204ENST00000618596 LOC105371045A0A1W2PR82 267 aa15.87■□□□□ 0.13
GPC5-204ENST00000618596 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
GPC5-204ENST00000618596 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
GPC5-204ENST00000618596 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
GPC5-204ENST00000618596 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
GPC5-204ENST00000618596 KIF21BO75037 1637 aa15.81■□□□□ 0.12
GPC5-204ENST00000618596 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
GPC5-204ENST00000618596 PPP6R1Q9UPN7 881 aa15.8■□□□□ 0.12
GPC5-204ENST00000618596 IGF1RP08069 1367 aa15.77■□□□□ 0.12
GPC5-204ENST00000618596 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
GPC5-204ENST00000618596 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
GPC5-204ENST00000618596 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
GPC5-204ENST00000618596 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
GPC5-204ENST00000618596 RAPGEF2Q9Y4G8 1499 aa15.74■□□□□ 0.11
GPC5-204ENST00000618596 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
GPC5-204ENST00000618596 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.11
GPC5-204ENST00000618596 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
GPC5-204ENST00000618596 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
GPC5-204ENST00000618596 CUL7Q14999 1698 aa15.71■□□□□ 0.11
GPC5-204ENST00000618596 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
GPC5-204ENST00000618596 GRIN2BQ13224 1484 aa15.68■□□□□ 0.1
GPC5-204ENST00000618596 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
GPC5-204ENST00000618596 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
GPC5-204ENST00000618596 ADAMTS12P58397 1594 aa15.65■□□□□ 0.1
GPC5-204ENST00000618596 ADRA2BP18089 450 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms