RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 NISCHQ9Y2I1 1504 aa17.68■□□□□ 0.42
CSGALNACT1-201ENST00000332246 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
CSGALNACT1-201ENST00000332246 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
CSGALNACT1-201ENST00000332246 SHROOM4Q9ULL8 1493 aa16.96■□□□□ 0.31
CSGALNACT1-201ENST00000332246 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
CSGALNACT1-201ENST00000332246 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
CSGALNACT1-201ENST00000332246 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
CSGALNACT1-201ENST00000332246 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
CSGALNACT1-201ENST00000332246 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
CSGALNACT1-201ENST00000332246 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
CSGALNACT1-201ENST00000332246 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
CSGALNACT1-201ENST00000332246 HRCP23327 699 aa15.55■□□□□ 0.08
CSGALNACT1-201ENST00000332246 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
CSGALNACT1-201ENST00000332246 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
CSGALNACT1-201ENST00000332246 CCER1Q8TC90 406 aaPredicted RBP15.31■□□□□ 0.04
CSGALNACT1-201ENST00000332246 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
CSGALNACT1-201ENST00000332246 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
CSGALNACT1-201ENST00000332246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
CSGALNACT1-201ENST00000332246 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
CSGALNACT1-201ENST00000332246 APLP2Q06481 763 aa15.05■□□□□ 0
CSGALNACT1-201ENST00000332246 ZEB1P37275 1124 aaPredicted RBP15.05■□□□□ -0
CSGALNACT1-201ENST00000332246 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
CSGALNACT1-201ENST00000332246 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
CSGALNACT1-201ENST00000332246 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CSGALNACT1-201ENST00000332246 ATP1B4Q9UN42 357 aaPredicted RBP14.86□□□□□ -0.03
CSGALNACT1-201ENST00000332246 ITGAEP38570 1179 aa14.82□□□□□ -0.04
CSGALNACT1-201ENST00000332246 ABCC9O60706 1549 aa14.76□□□□□ -0.05
CSGALNACT1-201ENST00000332246 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
CSGALNACT1-201ENST00000332246 DIEXFQ68CQ4 756 aaKnown RBP14.75□□□□□ -0.05
CSGALNACT1-201ENST00000332246 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
CSGALNACT1-201ENST00000332246 PELP1Q8IZL8 1130 aaKnown RBP14.65□□□□□ -0.06
CSGALNACT1-201ENST00000332246 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
CSGALNACT1-201ENST00000332246 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
CSGALNACT1-201ENST00000332246 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
CSGALNACT1-201ENST00000332246 CNGB1Q14028 1251 aaPredicted RBP14.55□□□□□ -0.08
CSGALNACT1-201ENST00000332246 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
CSGALNACT1-201ENST00000332246 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
CSGALNACT1-201ENST00000332246 BCANQ96GW7 911 aa14.45□□□□□ -0.1
CSGALNACT1-201ENST00000332246 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
CSGALNACT1-201ENST00000332246 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
CSGALNACT1-201ENST00000332246 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
CSGALNACT1-201ENST00000332246 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
CSGALNACT1-201ENST00000332246 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
CSGALNACT1-201ENST00000332246 NEFLP07196 543 aa14.3□□□□□ -0.12
CSGALNACT1-201ENST00000332246 FAM50AQ14320 339 aaKnown RBP14.27□□□□□ -0.13
CSGALNACT1-201ENST00000332246 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
CSGALNACT1-201ENST00000332246 P3H3Q8IVL6 736 aa14.25□□□□□ -0.13
CSGALNACT1-201ENST00000332246 MIER1Q8N108 512 aa14.25□□□□□ -0.13
CSGALNACT1-201ENST00000332246 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.14
CSGALNACT1-201ENST00000332246 HIRIP3Q9BW71 556 aaPredicted RBP14.17□□□□□ -0.14
CSGALNACT1-201ENST00000332246 ARID3CA6NKF2 412 aa14.14□□□□□ -0.15
CSGALNACT1-201ENST00000332246 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
CSGALNACT1-201ENST00000332246 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
CSGALNACT1-201ENST00000332246 TRIM52Q96A61 297 aa14.02□□□□□ -0.17
CSGALNACT1-201ENST00000332246 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
CSGALNACT1-201ENST00000332246 FKBP8Q14318 412 aa13.99□□□□□ -0.17
CSGALNACT1-201ENST00000332246 MYT1Q01538 1121 aa13.97□□□□□ -0.17
CSGALNACT1-201ENST00000332246 ZNF326Q5BKZ1 582 aaKnown RBP13.97□□□□□ -0.17
CSGALNACT1-201ENST00000332246 NACADO15069 1562 aa13.96□□□□□ -0.18
CSGALNACT1-201ENST00000332246 CEP162Q5TB80 1403 aa13.95□□□□□ -0.18
CSGALNACT1-201ENST00000332246 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
CSGALNACT1-201ENST00000332246 IRX6P78412 446 aaPredicted RBP13.94□□□□□ -0.18
CSGALNACT1-201ENST00000332246 SOGA1O94964 1423 aa13.92□□□□□ -0.18
CSGALNACT1-201ENST00000332246 ANP32CO43423 234 aa13.9□□□□□ -0.18
CSGALNACT1-201ENST00000332246 CLIP1P30622 1438 aa13.84□□□□□ -0.19
CSGALNACT1-201ENST00000332246 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
CSGALNACT1-201ENST00000332246 SIN3AQ96ST3 1273 aa13.82□□□□□ -0.2
CSGALNACT1-201ENST00000332246 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
CSGALNACT1-201ENST00000332246 HNRNPUQ00839 825 aaKnown RBP eCLIP13.8□□□□□ -0.2
CSGALNACT1-201ENST00000332246 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
CSGALNACT1-201ENST00000332246 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
CSGALNACT1-201ENST00000332246 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
CSGALNACT1-201ENST00000332246 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.2
CSGALNACT1-201ENST00000332246 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT1-201ENST00000332246 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
CSGALNACT1-201ENST00000332246 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
CSGALNACT1-201ENST00000332246 FBLN2P98095 1184 aa13.73□□□□□ -0.21
CSGALNACT1-201ENST00000332246 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
CSGALNACT1-201ENST00000332246 CDK11AQ9UQ88 783 aaPredicted RBP13.71□□□□□ -0.21
CSGALNACT1-201ENST00000332246 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.22
CSGALNACT1-201ENST00000332246 ZNF777Q9ULD5 760 aaPredicted RBP13.71□□□□□ -0.22
CSGALNACT1-201ENST00000332246 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
CSGALNACT1-201ENST00000332246 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CSGALNACT1-201ENST00000332246 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
CSGALNACT1-201ENST00000332246 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
CSGALNACT1-201ENST00000332246 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
CSGALNACT1-201ENST00000332246 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
CSGALNACT1-201ENST00000332246 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
CSGALNACT1-201ENST00000332246 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
CSGALNACT1-201ENST00000332246 WIZO95785 1651 aa13.64□□□□□ -0.23
CSGALNACT1-201ENST00000332246 NBR1Q14596 966 aa13.61□□□□□ -0.23
CSGALNACT1-201ENST00000332246 DAXXQ9UER7 740 aaPredicted RBP13.57□□□□□ -0.24
CSGALNACT1-201ENST00000332246 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
CSGALNACT1-201ENST00000332246 RTL5Q5HYW3 569 aaPredicted RBP13.56□□□□□ -0.24
CSGALNACT1-201ENST00000332246 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
CSGALNACT1-201ENST00000332246 KDM2AQ9Y2K7 1162 aa13.55□□□□□ -0.24
CSGALNACT1-201ENST00000332246 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
CSGALNACT1-201ENST00000332246 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
CSGALNACT1-201ENST00000332246 FOXD1Q16676 465 aa13.5□□□□□ -0.25
CSGALNACT1-201ENST00000332246 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms