RNA–Protein interactions for RNA: ENST00000595783.1

LINC01838-201, Transcript of long intergenic non-protein coding RNA 1838, humanhuman

TSL 1 (best) BASIC

Gene LINC01838, Length 1,657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01838-201ENST00000595783 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
LINC01838-201ENST00000595783 CCDC180Q9P1Z9 1646 aa19.66■□□□□ 0.74
LINC01838-201ENST00000595783 ABCC9O60706 1549 aa18.83■□□□□ 0.61
LINC01838-201ENST00000595783 ZCCHC6Q5VYS8 1495 aaKnown RBP18.68■□□□□ 0.58
LINC01838-201ENST00000595783 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
LINC01838-201ENST00000595783 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
LINC01838-201ENST00000595783 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
LINC01838-201ENST00000595783 NACADO15069 1562 aa18.41■□□□□ 0.54
LINC01838-201ENST00000595783 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
LINC01838-201ENST00000595783 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
LINC01838-201ENST00000595783 SHROOM4Q9ULL8 1493 aa17.91■□□□□ 0.46
LINC01838-201ENST00000595783 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
LINC01838-201ENST00000595783 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
LINC01838-201ENST00000595783 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.42
LINC01838-201ENST00000595783 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
LINC01838-201ENST00000595783 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
LINC01838-201ENST00000595783 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
LINC01838-201ENST00000595783 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
LINC01838-201ENST00000595783 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
LINC01838-201ENST00000595783 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
LINC01838-201ENST00000595783 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
LINC01838-201ENST00000595783 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
LINC01838-201ENST00000595783 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
LINC01838-201ENST00000595783 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
LINC01838-201ENST00000595783 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
LINC01838-201ENST00000595783 WIZO95785 1651 aa17.04■□□□□ 0.32
LINC01838-201ENST00000595783 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
LINC01838-201ENST00000595783 BAZ1BQ9UIG0 1483 aaKnown RBP16.94■□□□□ 0.3
LINC01838-201ENST00000595783 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
LINC01838-201ENST00000595783 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
LINC01838-201ENST00000595783 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
LINC01838-201ENST00000595783 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
LINC01838-201ENST00000595783 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
LINC01838-201ENST00000595783 CFTRP13569 1480 aa16.5■□□□□ 0.23
LINC01838-201ENST00000595783 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
LINC01838-201ENST00000595783 NESP48681 1621 aa16.41■□□□□ 0.22
LINC01838-201ENST00000595783 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
LINC01838-201ENST00000595783 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
LINC01838-201ENST00000595783 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
LINC01838-201ENST00000595783 CEP164Q9UPV0 1460 aa16.25■□□□□ 0.19
LINC01838-201ENST00000595783 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
LINC01838-201ENST00000595783 ERCC6Q03468 1493 aa16.22■□□□□ 0.19
LINC01838-201ENST00000595783 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
LINC01838-201ENST00000595783 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
LINC01838-201ENST00000595783 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
LINC01838-201ENST00000595783 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
LINC01838-201ENST00000595783 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
LINC01838-201ENST00000595783 CUX1P39880 1505 aa16.11■□□□□ 0.17
LINC01838-201ENST00000595783 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
LINC01838-201ENST00000595783 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
LINC01838-201ENST00000595783 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
LINC01838-201ENST00000595783 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
LINC01838-201ENST00000595783 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
LINC01838-201ENST00000595783 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
LINC01838-201ENST00000595783 WDR62O43379 1518 aa16.05■□□□□ 0.16
LINC01838-201ENST00000595783 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
LINC01838-201ENST00000595783 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
LINC01838-201ENST00000595783 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
LINC01838-201ENST00000595783 SOGA1O94964 1423 aa15.96■□□□□ 0.15
LINC01838-201ENST00000595783 CUX2O14529 1486 aa15.9■□□□□ 0.14
LINC01838-201ENST00000595783 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
LINC01838-201ENST00000595783 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
LINC01838-201ENST00000595783 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
LINC01838-201ENST00000595783 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
LINC01838-201ENST00000595783 EEA1Q15075 1411 aa15.86■□□□□ 0.13
LINC01838-201ENST00000595783 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
LINC01838-201ENST00000595783 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
LINC01838-201ENST00000595783 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
LINC01838-201ENST00000595783 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
LINC01838-201ENST00000595783 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
LINC01838-201ENST00000595783 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
LINC01838-201ENST00000595783 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
LINC01838-201ENST00000595783 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
LINC01838-201ENST00000595783 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC01838-201ENST00000595783 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
LINC01838-201ENST00000595783 IGF1RP08069 1367 aa15.73■□□□□ 0.11
LINC01838-201ENST00000595783 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
LINC01838-201ENST00000595783 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.1
LINC01838-201ENST00000595783 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
LINC01838-201ENST00000595783 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
LINC01838-201ENST00000595783 CARMIL1Q5VZK9 1371 aa15.66■□□□□ 0.1
LINC01838-201ENST00000595783 CUL7Q14999 1698 aa15.64■□□□□ 0.09
LINC01838-201ENST00000595783 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
LINC01838-201ENST00000595783 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
LINC01838-201ENST00000595783 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
LINC01838-201ENST00000595783 KIF21BO75037 1637 aa15.61■□□□□ 0.09
LINC01838-201ENST00000595783 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
LINC01838-201ENST00000595783 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
LINC01838-201ENST00000595783 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
LINC01838-201ENST00000595783 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
LINC01838-201ENST00000595783 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
LINC01838-201ENST00000595783 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
LINC01838-201ENST00000595783 SYNJ2O15056 1496 aa15.55■□□□□ 0.08
LINC01838-201ENST00000595783 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
LINC01838-201ENST00000595783 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
LINC01838-201ENST00000595783 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
LINC01838-201ENST00000595783 FBLN2P98095 1184 aa15.52■□□□□ 0.08
LINC01838-201ENST00000595783 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
LINC01838-201ENST00000595783 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
LINC01838-201ENST00000595783 CHD1O14646 1710 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms