Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH16O75309 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CDH16O75309 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.86■□□□□ 0.93
CDH16O75309 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH16O75309 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH16O75309 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH16O75309 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CDH16O75309 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH16O75309 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH16O75309 AC011484.1-201ENST00000377652 1995 ntBASIC20.85■□□□□ 0.93
CDH16O75309 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH16O75309 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDH16O75309 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.85■□□□□ 0.93
CDH16O75309 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.85■□□□□ 0.93
CDH16O75309 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDH16O75309 AC009237.3-201ENST00000393279 1427 ntBASIC20.85■□□□□ 0.93
CDH16O75309 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH16O75309 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH16O75309 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CDH16O75309 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH16O75309 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.84■□□□□ 0.93
CDH16O75309 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH16O75309 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.84■□□□□ 0.93
CDH16O75309 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH16O75309 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH16O75309 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH16O75309 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH16O75309 AC055733.4-201ENST00000638462 1354 ntBASIC20.84■□□□□ 0.93
CDH16O75309 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CDH16O75309 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH16O75309 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH16O75309 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDH16O75309 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH16O75309 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH16O75309 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH16O75309 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH16O75309 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CDH16O75309 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CDH16O75309 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH16O75309 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.83■□□□□ 0.92
CDH16O75309 AC008406.3-201ENST00000620001 1374 ntBASIC20.83■□□□□ 0.92
CDH16O75309 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CDH16O75309 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH16O75309 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH16O75309 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH16O75309 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDH16O75309 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDH16O75309 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH16O75309 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDH16O75309 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms