Protein–RNA interactions for Protein: Q9NR55

BATF3, Basic leucine zipper transcriptional factor ATF-like 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BATF3Q9NR55 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
BATF3Q9NR55 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BATF3Q9NR55 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BATF3Q9NR55 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BATF3Q9NR55 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.47■□□□□ 0.71
BATF3Q9NR55 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BATF3Q9NR55 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
BATF3Q9NR55 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
BATF3Q9NR55 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 AC018755.3-202ENST00000596210 929 ntBASIC19.46■□□□□ 0.71
BATF3Q9NR55 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BATF3Q9NR55 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BATF3Q9NR55 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BATF3Q9NR55 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BATF3Q9NR55 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 AL133373.2-201ENST00000623187 2828 ntBASIC19.45■□□□□ 0.7
BATF3Q9NR55 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.45■□□□□ 0.7
BATF3Q9NR55 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BATF3Q9NR55 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 AP004607.7-201ENST00000527152 1677 ntBASIC19.44■□□□□ 0.7
BATF3Q9NR55 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 MIR3960-201ENST00000583311 91 ntBASIC19.44■□□□□ 0.7
BATF3Q9NR55 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BATF3Q9NR55 AC007225.1-201ENST00000566331 1836 ntBASIC19.44■□□□□ 0.7
BATF3Q9NR55 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.44■□□□□ 0.7
BATF3Q9NR55 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
BATF3Q9NR55 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BATF3Q9NR55 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BATF3Q9NR55 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BATF3Q9NR55 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.42■□□□□ 0.7
BATF3Q9NR55 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.42■□□□□ 0.7
BATF3Q9NR55 RARRES2P7-201ENST00000567349 469 ntBASIC19.42■□□□□ 0.7
BATF3Q9NR55 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.42■□□□□ 0.7
BATF3Q9NR55 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BATF3Q9NR55 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
BATF3Q9NR55 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.41■□□□□ 0.7
BATF3Q9NR55 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.41■□□□□ 0.7
BATF3Q9NR55 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BATF3Q9NR55 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BATF3Q9NR55 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BATF3Q9NR55 AL390961.4-201ENST00000623958 2535 ntBASIC19.4■□□□□ 0.7
BATF3Q9NR55 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BATF3Q9NR55 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BATF3Q9NR55 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BATF3Q9NR55 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.4■□□□□ 0.7
BATF3Q9NR55 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.4■□□□□ 0.7
BATF3Q9NR55 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BATF3Q9NR55 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms