RNA–Protein interactions for RNA: ENST00000299506.2

TUB-201, Transcript of tubby bipartite transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUB, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUB-201ENST00000299506 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
TUB-201ENST00000299506 CCDC180Q9P1Z9 1646 aa43.42■■■■■ 4.54
TUB-201ENST00000299506 ZCCHC6Q5VYS8 1495 aaKnown RBP41.59■■■■■ 4.25
TUB-201ENST00000299506 ABCC9O60706 1549 aa41.22■■■■■ 4.19
TUB-201ENST00000299506 DCAF1Q9Y4B6 1507 aa40.99■■■■■ 4.15
TUB-201ENST00000299506 DCAF8L2P0C7V8 631 aa40.9■■■■■ 4.14
TUB-201ENST00000299506 MYO15BQ96JP2 1530 aa40.61■■■■■ 4.09
TUB-201ENST00000299506 NACADO15069 1562 aa40.45■■■■■ 4.07
TUB-201ENST00000299506 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
TUB-201ENST00000299506 SHROOM4Q9ULL8 1493 aa40.16■■■■■ 4.02
TUB-201ENST00000299506 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
TUB-201ENST00000299506 UNC13AQ9UPW8 1703 aa39.42■■■■□ 3.9
TUB-201ENST00000299506 BICRAQ9NZM4 1560 aa38.97■■■■□ 3.83
TUB-201ENST00000299506 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.79
TUB-201ENST00000299506 CECR2Q9BXF3 1484 aa38.5■■■■□ 3.75
TUB-201ENST00000299506 SUPT5HO00267 1087 aaKnown RBP38.47■■■■□ 3.75
TUB-201ENST00000299506 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
TUB-201ENST00000299506 RSF1Q96T23 1441 aaPredicted RBP38.3■■■■□ 3.72
TUB-201ENST00000299506 MROH2BQ7Z745 1585 aa38.26■■■■□ 3.72
TUB-201ENST00000299506 SMARCA4P51532 1647 aa38.19■■■■□ 3.7
TUB-201ENST00000299506 WIZO95785 1651 aa37.96■■■■□ 3.67
TUB-201ENST00000299506 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
TUB-201ENST00000299506 PEG3Q9GZU2 1588 aa37.73■■■■□ 3.63
TUB-201ENST00000299506 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
TUB-201ENST00000299506 ATAD2BQ9ULI0 1458 aa37.58■■■■□ 3.61
TUB-201ENST00000299506 TOP2AP11388 1531 aaKnown RBP37.57■■■■□ 3.6
TUB-201ENST00000299506 BAZ1BQ9UIG0 1483 aaKnown RBP37.37■■■■□ 3.57
TUB-201ENST00000299506 CC2D2AQ9P2K1 1620 aa37.34■■■■□ 3.57
TUB-201ENST00000299506 NCAPD3P42695 1498 aa37.3■■■■□ 3.56
TUB-201ENST00000299506 HMGXB3Q12766 1538 aa37.29■■■■□ 3.56
TUB-201ENST00000299506 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.53
TUB-201ENST00000299506 CHIC1Q5VXU3 224 aa36.67■■■■□ 3.46
TUB-201ENST00000299506 DNAJC5BQ9UF47 199 aa36.52■■■■□ 3.44
TUB-201ENST00000299506 CFTRP13569 1480 aa36.41■■■■□ 3.42
TUB-201ENST00000299506 PRDM2Q13029 1718 aa36.32■■■■□ 3.41
TUB-201ENST00000299506 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
TUB-201ENST00000299506 ABCC8Q09428 1581 aa36.29■■■■□ 3.4
TUB-201ENST00000299506 TRIM41Q8WV44 630 aa36.2■■■■□ 3.39
TUB-201ENST00000299506 LAMC3Q9Y6N6 1575 aa36.13■■■■□ 3.37
TUB-201ENST00000299506 NESP48681 1621 aa36.1■■■■□ 3.37
TUB-201ENST00000299506 WRNQ14191 1432 aaPredicted RBP eCLIP36.08■■■■□ 3.37
TUB-201ENST00000299506 SYNJ1O43426 1573 aa35.97■■■■□ 3.35
TUB-201ENST00000299506 FANCD2Q9BXW9 1451 aa35.94■■■■□ 3.34
TUB-201ENST00000299506 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
TUB-201ENST00000299506 BIVM-ERCC5R4GMW8 1640 aa35.85■■■■□ 3.33
TUB-201ENST00000299506 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
TUB-201ENST00000299506 CUX1P39880 1505 aa35.81■■■■□ 3.32
TUB-201ENST00000299506 CEP164Q9UPV0 1460 aa35.76■■■■□ 3.32
TUB-201ENST00000299506 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
TUB-201ENST00000299506 DNMBPQ6XZF7 1577 aa35.6■■■■□ 3.29
TUB-201ENST00000299506 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
TUB-201ENST00000299506 URB2Q14146 1524 aaKnown RBP35.51■■■■□ 3.28
TUB-201ENST00000299506 FAM9AQ8IZU1 332 aaPredicted RBP35.51■■■■□ 3.28
TUB-201ENST00000299506 SOGA1O94964 1423 aa35.51■■■■□ 3.27
TUB-201ENST00000299506 FGD5Q6ZNL6 1462 aa35.46■■■■□ 3.27
TUB-201ENST00000299506 EEA1Q15075 1411 aa35.41■■■■□ 3.26
TUB-201ENST00000299506 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
TUB-201ENST00000299506 RUSC2Q8N2Y8 1516 aa35.39■■■■□ 3.26
TUB-201ENST00000299506 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
TUB-201ENST00000299506 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
TUB-201ENST00000299506 WDR62O43379 1518 aa35.24■■■■□ 3.23
TUB-201ENST00000299506 LOC105371045A0A1W2PR82 267 aa35.23■■■■□ 3.23
TUB-201ENST00000299506 THOC2Q8NI27 1593 aaKnown RBP35.23■■■■□ 3.23
TUB-201ENST00000299506 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
TUB-201ENST00000299506 RAD54L2Q9Y4B4 1467 aa35.19■■■■□ 3.22
TUB-201ENST00000299506 CSRNP3Q8WYN3 585 aa35.18■■■■□ 3.22
TUB-201ENST00000299506 CUX2O14529 1486 aa35.16■■■■□ 3.22
TUB-201ENST00000299506 ABCA10Q8WWZ4 1543 aa35.14■■■■□ 3.22
TUB-201ENST00000299506 WDR97A6NE52 1622 aa35.12■■■■□ 3.21
TUB-201ENST00000299506 TARBP1Q13395 1621 aaKnown RBP35.05■■■■□ 3.2
TUB-201ENST00000299506 KIF21BO75037 1637 aa35.02■■■■□ 3.2
TUB-201ENST00000299506 EHMT2Q96KQ7 1210 aa35.01■■■■□ 3.2
TUB-201ENST00000299506 ABCA5Q8WWZ7 1642 aa34.93■■■■□ 3.18
TUB-201ENST00000299506 GOLGA3Q08378 1498 aa34.92■■■■□ 3.18
TUB-201ENST00000299506 IFT140Q96RY7 1462 aa34.91■■■■□ 3.18
TUB-201ENST00000299506 PRXQ9BXM0 1461 aa34.88■■■■□ 3.17
TUB-201ENST00000299506 IGF1RP08069 1367 aa34.86■■■■□ 3.17
TUB-201ENST00000299506 TDRD9Q8NDG6 1382 aaKnown RBP34.85■■■■□ 3.17
TUB-201ENST00000299506 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
TUB-201ENST00000299506 RAPGEF2Q9Y4G8 1499 aa34.82■■■■□ 3.16
TUB-201ENST00000299506 GAPVD1Q14C86 1478 aa34.81■■■■□ 3.16
TUB-201ENST00000299506 CUL7Q14999 1698 aa34.73■■■■□ 3.15
TUB-201ENST00000299506 PBRM1Q86U86 1689 aa34.72■■■■□ 3.15
TUB-201ENST00000299506 TNIKQ9UKE5 1360 aa34.72■■■■□ 3.15
TUB-201ENST00000299506 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
TUB-201ENST00000299506 UBTFP17480 764 aaKnown RBP34.71■■■■□ 3.15
TUB-201ENST00000299506 CARMIL1Q5VZK9 1371 aa34.69■■■■□ 3.14
TUB-201ENST00000299506 AQRO60306 1485 aaKnown RBP eCLIP34.69■■■■□ 3.14
TUB-201ENST00000299506 EIF4G3O43432 1585 aaKnown RBP34.66■■■■□ 3.14
TUB-201ENST00000299506 GRIN2BQ13224 1484 aa34.59■■■■□ 3.13
TUB-201ENST00000299506 CEP162Q5TB80 1403 aa34.54■■■■□ 3.12
TUB-201ENST00000299506 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
TUB-201ENST00000299506 FHAD1B1AJZ9 1412 aa34.43■■■■□ 3.1
TUB-201ENST00000299506 SNAPC4Q5SXM2 1469 aa34.4■■■■□ 3.1
TUB-201ENST00000299506 MAGI1Q96QZ7 1491 aaPredicted RBP34.35■■■■□ 3.09
TUB-201ENST00000299506 CLIP1P30622 1438 aa34.33■■■■□ 3.09
TUB-201ENST00000299506 CTTNBP2Q8WZ74 1663 aa34.33■■■■□ 3.09
TUB-201ENST00000299506 RANGAP1P46060 587 aaPredicted RBP34.22■■■■□ 3.07
TUB-201ENST00000299506 SYNJ2O15056 1496 aa34.21■■■■□ 3.07
TUB-201ENST00000299506 GRIN2AQ12879 1464 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms