Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AC135050.7-201ENST00000624508 2218 ntBASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CYSTM1Q9H1C7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CYSTM1Q9H1C7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CYSTM1Q9H1C7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CYSTM1Q9H1C7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CYSTM1Q9H1C7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 PLK5-205ENST00000642079 1969 ntBASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 AC067852.2-201ENST00000590513 2313 ntBASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CYSTM1Q9H1C7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CYSTM1Q9H1C7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CYSTM1Q9H1C7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CYSTM1Q9H1C7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms