Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CYSTM1Q9H1C7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CYSTM1Q9H1C7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYSTM1Q9H1C7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYSTM1Q9H1C7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYSTM1Q9H1C7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.05■□□□□ 0.8
CYSTM1Q9H1C7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CYSTM1Q9H1C7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYSTM1Q9H1C7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYSTM1Q9H1C7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CYSTM1Q9H1C7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CYSTM1Q9H1C7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYSTM1Q9H1C7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYSTM1Q9H1C7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.47■□□□□ 0.71
CYSTM1Q9H1C7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYSTM1Q9H1C7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYSTM1Q9H1C7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYSTM1Q9H1C7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CYSTM1Q9H1C7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYSTM1Q9H1C7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYSTM1Q9H1C7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYSTM1Q9H1C7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CYSTM1Q9H1C7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYSTM1Q9H1C7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CYSTM1Q9H1C7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC18.84■□□□□ 0.61
CYSTM1Q9H1C7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYSTM1Q9H1C7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYSTM1Q9H1C7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYSTM1Q9H1C7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYSTM1Q9H1C7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYSTM1Q9H1C7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.69■□□□□ 0.58
CYSTM1Q9H1C7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CYSTM1Q9H1C7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.65■□□□□ 0.58
CYSTM1Q9H1C7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CYSTM1Q9H1C7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CYSTM1Q9H1C7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYSTM1Q9H1C7 AL161658.1-201ENST00000623641 1967 ntBASIC18.46■□□□□ 0.55
CYSTM1Q9H1C7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYSTM1Q9H1C7 AC139426.1-201ENST00000568218 2529 ntBASIC18.4■□□□□ 0.54
CYSTM1Q9H1C7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYSTM1Q9H1C7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYSTM1Q9H1C7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYSTM1Q9H1C7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYSTM1Q9H1C7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
CYSTM1Q9H1C7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CYSTM1Q9H1C7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CYSTM1Q9H1C7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYSTM1Q9H1C7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYSTM1Q9H1C7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYSTM1Q9H1C7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYSTM1Q9H1C7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYSTM1Q9H1C7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CYSTM1Q9H1C7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYSTM1Q9H1C7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYSTM1Q9H1C7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYSTM1Q9H1C7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.01■□□□□ 0.47
CYSTM1Q9H1C7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYSTM1Q9H1C7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CYSTM1Q9H1C7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYSTM1Q9H1C7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYSTM1Q9H1C7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYSTM1Q9H1C7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYSTM1Q9H1C7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CYSTM1Q9H1C7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CYSTM1Q9H1C7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CYSTM1Q9H1C7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYSTM1Q9H1C7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17.86■□□□□ 0.45
CYSTM1Q9H1C7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CYSTM1Q9H1C7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CYSTM1Q9H1C7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC17.81■□□□□ 0.44
CYSTM1Q9H1C7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYSTM1Q9H1C7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CYSTM1Q9H1C7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYSTM1Q9H1C7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYSTM1Q9H1C7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYSTM1Q9H1C7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CYSTM1Q9H1C7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYSTM1Q9H1C7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.66■□□□□ 0.42
CYSTM1Q9H1C7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CYSTM1Q9H1C7 AC135731.1-201ENST00000569415 2548 ntBASIC17.63■□□□□ 0.41
CYSTM1Q9H1C7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CYSTM1Q9H1C7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CYSTM1Q9H1C7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.59■□□□□ 0.41
CYSTM1Q9H1C7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.57■□□□□ 0.4
CYSTM1Q9H1C7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CYSTM1Q9H1C7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CYSTM1Q9H1C7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CYSTM1Q9H1C7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CYSTM1Q9H1C7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CYSTM1Q9H1C7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms