RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 NISCHQ9Y2I1 1504 aa49.72■■■■■ 5.55
SOX18-201ENST00000340356 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.54
SOX18-201ENST00000340356 ZCCHC6Q5VYS8 1495 aaKnown RBP41.7■■■■■ 4.27
SOX18-201ENST00000340356 ABCC9O60706 1549 aa41.47■■■■■ 4.23
SOX18-201ENST00000340356 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
SOX18-201ENST00000340356 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
SOX18-201ENST00000340356 MYO15BQ96JP2 1530 aa40.63■■■■■ 4.1
SOX18-201ENST00000340356 NACADO15069 1562 aa40.53■■■■■ 4.08
SOX18-201ENST00000340356 SHROOM4Q9ULL8 1493 aa40.47■■■■■ 4.07
SOX18-201ENST00000340356 RB1CC1Q8TDY2 1594 aa40.27■■■■■ 4.04
SOX18-201ENST00000340356 SCRIBQ14160 1630 aa40.02■■■■■ 4
SOX18-201ENST00000340356 UNC13AQ9UPW8 1703 aa39.53■■■■□ 3.92
SOX18-201ENST00000340356 BICRAQ9NZM4 1560 aa39.14■■■■□ 3.86
SOX18-201ENST00000340356 PABPN1Q86U42 306 aaKnown RBP eCLIP39.08■■■■□ 3.85
SOX18-201ENST00000340356 SUPT5HO00267 1087 aaKnown RBP38.75■■■■□ 3.79
SOX18-201ENST00000340356 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
SOX18-201ENST00000340356 RSF1Q96T23 1441 aaPredicted RBP38.48■■■■□ 3.75
SOX18-201ENST00000340356 MROH2BQ7Z745 1585 aa38.45■■■■□ 3.75
SOX18-201ENST00000340356 BAZ1AQ9NRL2 1556 aaPredicted RBP38.38■■■■□ 3.73
SOX18-201ENST00000340356 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
SOX18-201ENST00000340356 WIZO95785 1651 aa38.13■■■■□ 3.69
SOX18-201ENST00000340356 EIF4G1Q04637 1599 aaKnown RBP37.96■■■■□ 3.67
SOX18-201ENST00000340356 PEG3Q9GZU2 1588 aa37.79■■■■□ 3.64
SOX18-201ENST00000340356 ATAD2BQ9ULI0 1458 aa37.74■■■■□ 3.63
SOX18-201ENST00000340356 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
SOX18-201ENST00000340356 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
SOX18-201ENST00000340356 BAZ1BQ9UIG0 1483 aaKnown RBP37.5■■■■□ 3.59
SOX18-201ENST00000340356 CC2D2AQ9P2K1 1620 aa37.49■■■■□ 3.59
SOX18-201ENST00000340356 NCAPD3P42695 1498 aa37.43■■■■□ 3.58
SOX18-201ENST00000340356 HMGXB3Q12766 1538 aa37.34■■■■□ 3.57
SOX18-201ENST00000340356 CCDC88BA6NC98 1476 aa37.31■■■■□ 3.56
SOX18-201ENST00000340356 CHIC1Q5VXU3 224 aa36.9■■■■□ 3.5
SOX18-201ENST00000340356 DNAJC5BQ9UF47 199 aa36.9■■■■□ 3.5
SOX18-201ENST00000340356 CFTRP13569 1480 aa36.53■■■■□ 3.44
SOX18-201ENST00000340356 ABCC8Q09428 1581 aa36.48■■■■□ 3.43
SOX18-201ENST00000340356 CADPSQ9ULU8 1353 aa36.46■■■■□ 3.43
SOX18-201ENST00000340356 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
SOX18-201ENST00000340356 NESP48681 1621 aa36.34■■■■□ 3.41
SOX18-201ENST00000340356 PRDM2Q13029 1718 aa36.3■■■■□ 3.4
SOX18-201ENST00000340356 WRNQ14191 1432 aaPredicted RBP eCLIP36.2■■■■□ 3.39
SOX18-201ENST00000340356 LAMC3Q9Y6N6 1575 aa36.19■■■■□ 3.38
SOX18-201ENST00000340356 SYNJ1O43426 1573 aa36.12■■■■□ 3.37
SOX18-201ENST00000340356 FANCD2Q9BXW9 1451 aa36.08■■■■□ 3.37
SOX18-201ENST00000340356 CUX1P39880 1505 aa35.96■■■■□ 3.35
SOX18-201ENST00000340356 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
SOX18-201ENST00000340356 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
SOX18-201ENST00000340356 BIVM-ERCC5R4GMW8 1640 aa35.91■■■■□ 3.34
SOX18-201ENST00000340356 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
SOX18-201ENST00000340356 KIF21AQ7Z4S6 1674 aa35.87■■■■□ 3.33
SOX18-201ENST00000340356 FAM9AQ8IZU1 332 aaPredicted RBP35.81■■■■□ 3.32
SOX18-201ENST00000340356 SOGA1O94964 1423 aa35.72■■■■□ 3.31
SOX18-201ENST00000340356 DNMBPQ6XZF7 1577 aa35.68■■■■□ 3.3
SOX18-201ENST00000340356 URB2Q14146 1524 aaKnown RBP35.68■■■■□ 3.3
SOX18-201ENST00000340356 TOPBP1Q92547 1522 aa35.66■■■■□ 3.3
SOX18-201ENST00000340356 RUSC2Q8N2Y8 1516 aa35.64■■■■□ 3.3
SOX18-201ENST00000340356 FGD5Q6ZNL6 1462 aa35.61■■■■□ 3.29
SOX18-201ENST00000340356 LOC105371045A0A1W2PR82 267 aa35.54■■■■□ 3.28
SOX18-201ENST00000340356 ERCC6Q03468 1493 aa35.53■■■■□ 3.28
SOX18-201ENST00000340356 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.27
SOX18-201ENST00000340356 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
SOX18-201ENST00000340356 EEA1Q15075 1411 aa35.44■■■■□ 3.26
SOX18-201ENST00000340356 RAD54L2Q9Y4B4 1467 aa35.4■■■■□ 3.26
SOX18-201ENST00000340356 EHMT2Q96KQ7 1210 aa35.39■■■■□ 3.26
SOX18-201ENST00000340356 CSRNP3Q8WYN3 585 aa35.35■■■■□ 3.25
SOX18-201ENST00000340356 WDR62O43379 1518 aa35.34■■■■□ 3.25
SOX18-201ENST00000340356 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
SOX18-201ENST00000340356 CUX2O14529 1486 aa35.31■■■■□ 3.24
SOX18-201ENST00000340356 KIF27Q86VH2 1401 aa35.29■■■■□ 3.24
SOX18-201ENST00000340356 ABCA10Q8WWZ4 1543 aa35.24■■■■□ 3.23
SOX18-201ENST00000340356 WDR97A6NE52 1622 aa35.19■■■■□ 3.22
SOX18-201ENST00000340356 TARBP1Q13395 1621 aaKnown RBP35.16■■■■□ 3.22
SOX18-201ENST00000340356 TDRD9Q8NDG6 1382 aaKnown RBP35.07■■■■□ 3.2
SOX18-201ENST00000340356 KIF21BO75037 1637 aa35.06■■■■□ 3.2
SOX18-201ENST00000340356 IGF1RP08069 1367 aa35.05■■■■□ 3.2
SOX18-201ENST00000340356 ABCA5Q8WWZ7 1642 aa35.01■■■■□ 3.19
SOX18-201ENST00000340356 GOLGA3Q08378 1498 aa35■■■■□ 3.19
SOX18-201ENST00000340356 IFT140Q96RY7 1462 aa35■■■■□ 3.19
SOX18-201ENST00000340356 PRXQ9BXM0 1461 aa35■■■■□ 3.19
SOX18-201ENST00000340356 RAPGEF2Q9Y4G8 1499 aa34.99■■■■□ 3.19
SOX18-201ENST00000340356 GAPVD1Q14C86 1478 aa34.94■■■■□ 3.18
SOX18-201ENST00000340356 ZNF608Q9ULD9 1512 aaPredicted RBP34.92■■■■□ 3.18
SOX18-201ENST00000340356 UBTFP17480 764 aaKnown RBP34.9■■■■□ 3.18
SOX18-201ENST00000340356 AQRO60306 1485 aaKnown RBP eCLIP34.9■■■■□ 3.182e-6■■■■□ 26.2
SOX18-201ENST00000340356 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
SOX18-201ENST00000340356 CARMIL1Q5VZK9 1371 aa34.85■■■■□ 3.17
SOX18-201ENST00000340356 TNIKQ9UKE5 1360 aa34.83■■■■□ 3.17
SOX18-201ENST00000340356 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
SOX18-201ENST00000340356 EIF4G3O43432 1585 aaKnown RBP34.76■■■■□ 3.16
SOX18-201ENST00000340356 CUL7Q14999 1698 aa34.76■■■■□ 3.15
SOX18-201ENST00000340356 GRIN2BQ13224 1484 aa34.7■■■■□ 3.15
SOX18-201ENST00000340356 CEP162Q5TB80 1403 aa34.67■■■■□ 3.14
SOX18-201ENST00000340356 ADAMTS12P58397 1594 aa34.58■■■■□ 3.13
SOX18-201ENST00000340356 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
SOX18-201ENST00000340356 FHAD1B1AJZ9 1412 aa34.53■■■■□ 3.12
SOX18-201ENST00000340356 RANGAP1P46060 587 aaPredicted RBP34.53■■■■□ 3.12
SOX18-201ENST00000340356 CLIP1P30622 1438 aa34.46■■■■□ 3.11
SOX18-201ENST00000340356 MAGI1Q96QZ7 1491 aaPredicted RBP34.42■■■■□ 3.1
SOX18-201ENST00000340356 CTTNBP2Q8WZ74 1663 aa34.36■■■■□ 3.09
SOX18-201ENST00000340356 SYNJ2O15056 1496 aa34.31■■■■□ 3.08
SOX18-201ENST00000340356 GRIN2AQ12879 1464 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms