Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CLUH-213ENST00000576309 433 ntTSL 320.13■□□□□ 0.819e-7■■■■□ 25.2
XRN2Q9H0D6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.031e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-210ENST00000492488 822 ntTSL 217.95■□□□□ 0.461e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-209ENST00000489509 920 ntTSL 217.88■□□□□ 0.451e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-206ENST00000482774 2376 ntTSL 317.81■□□□□ 0.441e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.351e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.07■□□□□ 0.161e-11■■■■□ 25.2
XRN2Q9H0D6 ING5-211ENST00000493261 543 ntTSL 214.26□□□□□ -0.131e-11■■■■□ 25.2
XRN2Q9H0D6 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC12.25□□□□□ -0.452e-6■■■■□ 25.2
XRN2Q9H0D6 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC11.55□□□□□ -0.562e-6■■■■□ 25.2
XRN2Q9H0D6 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.652e-6■■■■□ 25.2
XRN2Q9H0D6 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.992e-6■■■■□ 25.2
XRN2Q9H0D6 ING5-204ENST00000445620 662 ntTSL 37.46□□□□□ -1.221e-11■■■■□ 25.2
XRN2Q9H0D6 LRRC41-205ENST00000498402 2068 ntTSL 217.76■□□□□ 0.436e-7■■■■□ 25.1
XRN2Q9H0D6 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.066e-7■■■■□ 25.1
XRN2Q9H0D6 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.91□□□□□ -0.56e-7■■■■□ 25.1
XRN2Q9H0D6 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.616e-7■■■■□ 25.1
XRN2Q9H0D6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.75■□□□□ 0.913e-7■■■■□ 25.1
XRN2Q9H0D6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.13■□□□□ 0.813e-7■■■■□ 25.1
XRN2Q9H0D6 SH3BP2-206ENST00000503219 551 ntTSL 419.32■□□□□ 0.681e-6■■■■□ 25.1
XRN2Q9H0D6 UBE2G1-203ENST00000571980 984 ntTSL 526.04■■□□□ 1.769e-7■■■■□ 25.1
XRN2Q9H0D6 UBE2G1-206ENST00000574633 863 ntTSL 224.33■■□□□ 1.499e-7■■■■□ 25.1
XRN2Q9H0D6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.98■□□□□ 0.799e-7■■■■□ 25.1
XRN2Q9H0D6 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.399e-7■■■■□ 25.1
XRN2Q9H0D6 DOT1L-204ENST00000457590 2907 ntTSL 515.39■□□□□ 0.051e-6■■■■□ 25.1
XRN2Q9H0D6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.322e-6■■■■□ 25.1
XRN2Q9H0D6 TCF12-222ENST00000561152 675 ntTSL 529.95■■■□□ 2.393e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.213e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-209ENST00000527368 812 ntTSL 528.72■■■□□ 2.193e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-213ENST00000582355 1246 ntTSL 527.86■■■□□ 2.052e-8■■■■□ 25
XRN2Q9H0D6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.963e-6■■■■□ 25
XRN2Q9H0D6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.853e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.843e-6■■■■□ 25
XRN2Q9H0D6 TCF12-208ENST00000557947 575 ntTSL 426.24■■□□□ 1.793e-6■■■■□ 25
XRN2Q9H0D6 TPST2-205ENST00000442495 586 ntTSL 226.19■■□□□ 1.783e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.733e-6■■■■□ 25
XRN2Q9H0D6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.683e-6■■■■□ 25
XRN2Q9H0D6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.51■■□□□ 1.673e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.583e-6■■■■□ 25
XRN2Q9H0D6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.534e-6■■■■□ 25
XRN2Q9H0D6 TPST2-207ENST00000450022 544 ntTSL 324.58■■□□□ 1.533e-6■■■■□ 25
XRN2Q9H0D6 RAC3-202ENST00000580965 831 ntTSL 224.19■■□□□ 1.463e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.14■■□□□ 1.462e-8■■■■□ 25
XRN2Q9H0D6 ASPSCR1-219ENST00000584454 1919 ntTSL 1 (best)24.04■■□□□ 1.442e-8■■■■□ 25
XRN2Q9H0D6 FBXO3-212ENST00000533103 570 ntTSL 423.96■■□□□ 1.433e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-202ENST00000524551 548 ntAPPRIS ALT2 TSL 523.94■■□□□ 1.423e-6■■■■□ 25
XRN2Q9H0D6 TRADD-204ENST00000566104 669 ntTSL 223.84■■□□□ 1.413e-6■■■■□ 25
XRN2Q9H0D6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.399e-8■■■■□ 25
XRN2Q9H0D6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.32e-8■■■■□ 25
XRN2Q9H0D6 UBE2I-215ENST00000567074 884 ntTSL 1 (best)23.1■■□□□ 1.293e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-217ENST00000534325 583 ntAPPRIS ALT2 TSL 322.83■■□□□ 1.253e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.232e-8■■■■□ 25
XRN2Q9H0D6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.64■■□□□ 1.213e-6■■■■□ 25
XRN2Q9H0D6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.23e-6■■■■□ 25
XRN2Q9H0D6 TPST2-204ENST00000440953 544 ntTSL 521.75■■□□□ 1.073e-6■■■■□ 25
XRN2Q9H0D6 ANAPC2-207ENST00000495611 747 ntTSL 221.61■■□□□ 1.053e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-221ENST00000585274 984 ntTSL 521.56■■□□□ 1.043e-8■■■■□ 25
XRN2Q9H0D6 UBE2I-208ENST00000473256 1771 ntTSL 220.95■□□□□ 0.943e-6■■■■□ 25
XRN2Q9H0D6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.933e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-204ENST00000460560 2111 ntTSL 520.66■□□□□ 0.93e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-210ENST00000581608 2387 ntTSL 220.47■□□□□ 0.873e-8■■■■□ 25
XRN2Q9H0D6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.833e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-216ENST00000567383 538 ntTSL 420.23■□□□□ 0.833e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-217ENST00000568209 266 ntTSL 519.96■□□□□ 0.793e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-218ENST00000568288 501 ntTSL 519.94■□□□□ 0.783e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.753e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-210ENST00000562482 735 ntTSL 219.38■□□□□ 0.693e-6■■■■□ 25
XRN2Q9H0D6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.95■□□□□ 0.627e-7■■■■□ 25
XRN2Q9H0D6 PRPF31-207ENST00000466404 1837 ntTSL 218.74■□□□□ 0.597e-7■■■■□ 25
XRN2Q9H0D6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.583e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-218ENST00000583744 539 ntTSL 418.55■□□□□ 0.563e-8■■■■□ 25
XRN2Q9H0D6 ASPSCR1-206ENST00000578361 590 ntTSL 218.37■□□□□ 0.533e-14■■■■□ 25
XRN2Q9H0D6 AKAP17A-203ENST00000474361 3232 ntTSL 1 (best)17.97■□□□□ 0.474e-6■■■■□ 25
XRN2Q9H0D6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.444e-6■■■■□ 25
XRN2Q9H0D6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.76■□□□□ 0.439e-8■■■■□ 25
XRN2Q9H0D6 SS18L1-205ENST00000492466 899 ntTSL 517.66■□□□□ 0.423e-6■■■■□ 25
XRN2Q9H0D6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.49e-8■■■■□ 25
XRN2Q9H0D6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.393e-6■■■■□ 25
XRN2Q9H0D6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.382e-7■■■■□ 25
XRN2Q9H0D6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.349e-8■■■■□ 25
XRN2Q9H0D6 UBE2I-209ENST00000562470 433 ntTSL 217.17■□□□□ 0.343e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-204ENST00000577733 5503 ntTSL 217.06■□□□□ 0.322e-8■■■■□ 25
XRN2Q9H0D6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.327e-7■■■■□ 25
XRN2Q9H0D6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.85■□□□□ 0.297e-7■■■■□ 25
XRN2Q9H0D6 TMEM41B-201ENST00000299596 1443 ntTSL 1 (best)16.67■□□□□ 0.263e-6■■■■□ 25
XRN2Q9H0D6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.196e-7■■■■□ 25
XRN2Q9H0D6 FBXO3-211ENST00000532927 945 ntTSL 216.15■□□□□ 0.183e-6■■■■□ 25
XRN2Q9H0D6 PPP1R12A-208ENST00000547330 2275 ntTSL 1 (best)15.96■□□□□ 0.153e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.133e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-216ENST00000484416 538 ntTSL 415.87■□□□□ 0.133e-6■■■■□ 25
XRN2Q9H0D6 STRN4-203ENST00000435164 1551 ntTSL 215.79■□□□□ 0.122e-11■■■■□ 25
XRN2Q9H0D6 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.085e-7■■■■□ 25
XRN2Q9H0D6 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.073e-6■■■■□ 25
XRN2Q9H0D6 MEGF6-205ENST00000485002 4705 ntTSL 515.45■□□□□ 0.063e-6■■■■□ 25
XRN2Q9H0D6 C11orf80-211ENST00000531400 367 ntTSL 315.26■□□□□ 0.033e-6■■■■□ 25
XRN2Q9H0D6 HSPG2-212ENST00000493940 584 ntTSL 515.05■□□□□ -03e-6■■■■□ 25
XRN2Q9H0D6 NFAT5-210ENST00000567990 2855 ntTSL 514.72□□□□□ -0.053e-11■■■■□ 25
XRN2Q9H0D6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC14.42□□□□□ -0.13e-6■■■■□ 25
XRN2Q9H0D6 FBXO3-206ENST00000529137 584 ntTSL 514.1□□□□□ -0.153e-6■■■■□ 25
Retrieved 100 of 21,068 protein–RNA pairs in 129.1 ms