Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AP006587.3-201ENST00000525742 1516 ntBASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB1Q8WWH5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 AC092171.4-201ENST00000609130 632 ntBASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 AC121338.2-201ENST00000622535 1744 ntBASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB1Q8WWH5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TRUB1Q8WWH5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB1Q8WWH5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 AP005435.1-201ENST00000529293 1178 ntBASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRUB1Q8WWH5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AC020907.5-201ENST00000624372 1936 ntBASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.92■□□□□ 0.62
TRUB1Q8WWH5 AC010525.1-201ENST00000585559 441 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms