Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 BX005040.4-201ENST00000637145 1518 ntBASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP2BQ9UQN3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 AP001330.3-201ENST00000520123 633 ntBASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHMP2BQ9UQN3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHMP2BQ9UQN3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 AC008406.3-201ENST00000620001 1374 ntBASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 AL391422.3-201ENST00000603791 2761 ntBASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 AC027702.1-201ENST00000563810 1770 ntBASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP2BQ9UQN3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP2BQ9UQN3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 MIR572-201ENST00000384983 95 ntBASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 AC106739.1-201ENST00000617035 715 ntBASIC21.08■□□□□ 0.97
CHMP2BQ9UQN3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP2BQ9UQN3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms