Protein–RNA interactions for Protein: Q9H7U1

CCSER2, Serine-rich coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2Q9H7U1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 MIPEPP3-201ENST00000412105 444 ntBASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.7■■□□□ 1.06
CCSER2Q9H7U1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCSER2Q9H7U1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 AC069152.1-201ENST00000438030 544 ntBASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 AC010980.2-201ENST00000587099 1412 ntBASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCSER2Q9H7U1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 BX276092.2-201ENST00000417668 665 ntBASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCSER2Q9H7U1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.66■■□□□ 1.06
CCSER2Q9H7U1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 AC133041.1-202ENST00000642053 222 ntBASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCSER2Q9H7U1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms