RNA–Protein interactions for RNA: ENST00000388922.8

ACVRL1-201, Transcript of activin A receptor like type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACVRL1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACVRL1-201ENST00000388922 NISCHQ9Y2I1 1504 aa46.17■■■■■ 4.98
ACVRL1-201ENST00000388922 CCDC180Q9P1Z9 1646 aa39.71■■■■□ 3.95
ACVRL1-201ENST00000388922 ZCCHC6Q5VYS8 1495 aaKnown RBP39.01■■■■□ 3.83
ACVRL1-201ENST00000388922 SHROOM4Q9ULL8 1493 aa38.54■■■■□ 3.76
ACVRL1-201ENST00000388922 DCAF1Q9Y4B6 1507 aa38.13■■■■□ 3.69
ACVRL1-201ENST00000388922 DCAF8L2P0C7V8 631 aa37.86■■■■□ 3.65
ACVRL1-201ENST00000388922 SUPT5HO00267 1087 aaKnown RBP37.6■■■■□ 3.61
ACVRL1-201ENST00000388922 MYO15BQ96JP2 1530 aa37.24■■■■□ 3.55
ACVRL1-201ENST00000388922 ABCC9O60706 1549 aa37.16■■■■□ 3.54
ACVRL1-201ENST00000388922 SCRIBQ14160 1630 aa36.76■■■■□ 3.48
ACVRL1-201ENST00000388922 NACADO15069 1562 aa36.73■■■■□ 3.47
ACVRL1-201ENST00000388922 CHIC1Q5VXU3 224 aa36.55■■■■□ 3.44
ACVRL1-201ENST00000388922 RSF1Q96T23 1441 aaPredicted RBP36.26■■■■□ 3.4
ACVRL1-201ENST00000388922 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
ACVRL1-201ENST00000388922 CECR2Q9BXF3 1484 aa35.84■■■■□ 3.33
ACVRL1-201ENST00000388922 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
ACVRL1-201ENST00000388922 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
ACVRL1-201ENST00000388922 WIZO95785 1651 aa35.55■■■■□ 3.28
ACVRL1-201ENST00000388922 BAZ1AQ9NRL2 1556 aaPredicted RBP35.55■■■■□ 3.28
ACVRL1-201ENST00000388922 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
ACVRL1-201ENST00000388922 LOC105371045A0A1W2PR82 267 aa35.24■■■■□ 3.23
ACVRL1-201ENST00000388922 TRIM41Q8WV44 630 aa35.23■■■■□ 3.23
ACVRL1-201ENST00000388922 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
ACVRL1-201ENST00000388922 TOP2AP11388 1531 aaKnown RBP35.14■■■■□ 3.22
ACVRL1-201ENST00000388922 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
ACVRL1-201ENST00000388922 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
ACVRL1-201ENST00000388922 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
ACVRL1-201ENST00000388922 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
ACVRL1-201ENST00000388922 PCGF6Q9BYE7 350 aa34.77■■■■□ 3.16
ACVRL1-201ENST00000388922 PEG3Q9GZU2 1588 aa34.76■■■■□ 3.16
ACVRL1-201ENST00000388922 FAM9AQ8IZU1 332 aaPredicted RBP34.68■■■■□ 3.14
ACVRL1-201ENST00000388922 HRCP23327 699 aa34.64■■■■□ 3.14
ACVRL1-201ENST00000388922 ABCC8Q09428 1581 aa34.49■■■■□ 3.11
ACVRL1-201ENST00000388922 TRIM26Q12899 539 aaPredicted RBP34.45■■■■□ 3.11
ACVRL1-201ENST00000388922 ATAD2BQ9ULI0 1458 aa34.42■■■■□ 3.1
ACVRL1-201ENST00000388922 BAZ1BQ9UIG0 1483 aaKnown RBP34.29■■■■□ 3.08
ACVRL1-201ENST00000388922 EHMT2Q96KQ7 1210 aa34.2■■■■□ 3.06
ACVRL1-201ENST00000388922 EEA1Q15075 1411 aa34.13■■■■□ 3.05
ACVRL1-201ENST00000388922 WRNQ14191 1432 aaPredicted RBP eCLIP34.09■■■■□ 3.05
ACVRL1-201ENST00000388922 SOGA1O94964 1423 aa34.06■■■■□ 3.04
ACVRL1-201ENST00000388922 HMGXB3Q12766 1538 aa33.96■■■■□ 3.03
ACVRL1-201ENST00000388922 SYNJ1O43426 1573 aa33.94■■■■□ 3.02
ACVRL1-201ENST00000388922 NCAPD3P42695 1498 aa33.91■■■■□ 3.02
ACVRL1-201ENST00000388922 CSRNP3Q8WYN3 585 aa33.89■■■■□ 3.02
ACVRL1-201ENST00000388922 RUSC2Q8N2Y8 1516 aa33.88■■■■□ 3.01
ACVRL1-201ENST00000388922 TNIKQ9UKE5 1360 aa33.85■■■■□ 3.01
ACVRL1-201ENST00000388922 CEP162Q5TB80 1403 aa33.77■■■■□ 3
ACVRL1-201ENST00000388922 GOLGA3Q08378 1498 aa33.75■■■□□ 2.99
ACVRL1-201ENST00000388922 PPARGC1BQ86YN6 1023 aaKnown RBP33.71■■■□□ 2.99
ACVRL1-201ENST00000388922 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
ACVRL1-201ENST00000388922 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
ACVRL1-201ENST00000388922 KIF21BO75037 1637 aa33.67■■■□□ 2.98
ACVRL1-201ENST00000388922 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
ACVRL1-201ENST00000388922 BIVM-ERCC5R4GMW8 1640 aa33.63■■■□□ 2.97
ACVRL1-201ENST00000388922 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
ACVRL1-201ENST00000388922 ZEB1P37275 1124 aaPredicted RBP33.61■■■□□ 2.97
ACVRL1-201ENST00000388922 UBTFP17480 764 aaKnown RBP33.58■■■□□ 2.97
ACVRL1-201ENST00000388922 CFTRP13569 1480 aa33.48■■■□□ 2.95
ACVRL1-201ENST00000388922 PRDM2Q13029 1718 aa33.39■■■□□ 2.94
ACVRL1-201ENST00000388922 CUX1P39880 1505 aa33.35■■■□□ 2.93
ACVRL1-201ENST00000388922 RAPGEF2Q9Y4G8 1499 aa33.3■■■□□ 2.92
ACVRL1-201ENST00000388922 CLIP1P30622 1438 aa33.25■■■□□ 2.91
ACVRL1-201ENST00000388922 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
ACVRL1-201ENST00000388922 PRXQ9BXM0 1461 aa33.18■■■□□ 2.9
ACVRL1-201ENST00000388922 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
ACVRL1-201ENST00000388922 VPS8Q8N3P4 1428 aa33.12■■■□□ 2.89
ACVRL1-201ENST00000388922 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
ACVRL1-201ENST00000388922 TTBK1Q5TCY1 1321 aaPredicted RBP33.02■■■□□ 2.88
ACVRL1-201ENST00000388922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.95■■■□□ 2.87
ACVRL1-201ENST00000388922 CCER1Q8TC90 406 aaPredicted RBP32.92■■■□□ 2.86
ACVRL1-201ENST00000388922 APLP2Q06481 763 aa32.81■■■□□ 2.84
ACVRL1-201ENST00000388922 FGD5Q6ZNL6 1462 aa32.81■■■□□ 2.84
ACVRL1-201ENST00000388922 ARAP1Q96P48 1450 aa32.81■■■□□ 2.84
ACVRL1-201ENST00000388922 CUX2O14529 1486 aa32.81■■■□□ 2.84
ACVRL1-201ENST00000388922 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
ACVRL1-201ENST00000388922 RANGAP1P46060 587 aaPredicted RBP32.76■■■□□ 2.83
ACVRL1-201ENST00000388922 IGF1RP08069 1367 aa32.73■■■□□ 2.83
ACVRL1-201ENST00000388922 DNMBPQ6XZF7 1577 aa32.69■■■□□ 2.82
ACVRL1-201ENST00000388922 NESP48681 1621 aa32.64■■■□□ 2.82
ACVRL1-201ENST00000388922 ARHGAP35Q9NRY4 1499 aa32.61■■■□□ 2.81
ACVRL1-201ENST00000388922 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
ACVRL1-201ENST00000388922 CARMIL1Q5VZK9 1371 aa32.58■■■□□ 2.81
ACVRL1-201ENST00000388922 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
ACVRL1-201ENST00000388922 ABCA10Q8WWZ4 1543 aa32.52■■■□□ 2.8
ACVRL1-201ENST00000388922 POLA1P09884 1462 aaPredicted RBP32.49■■■□□ 2.79
ACVRL1-201ENST00000388922 HNRNPUL2Q1KMD3 747 aaKnown RBP32.47■■■□□ 2.79
ACVRL1-201ENST00000388922 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
ACVRL1-201ENST00000388922 KANK4Q5T7N3 995 aaPredicted RBP32.38■■■□□ 2.77
ACVRL1-201ENST00000388922 CUL7Q14999 1698 aa32.36■■■□□ 2.77
ACVRL1-201ENST00000388922 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
ACVRL1-201ENST00000388922 URB2Q14146 1524 aaKnown RBP32.34■■■□□ 2.77
ACVRL1-201ENST00000388922 MAP3K1Q13233 1512 aa32.32■■■□□ 2.77
ACVRL1-201ENST00000388922 RRBP1Q9P2E9 1410 aaKnown RBP32.32■■■□□ 2.76
ACVRL1-201ENST00000388922 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
ACVRL1-201ENST00000388922 KIF21AQ7Z4S6 1674 aa32.29■■■□□ 2.76
ACVRL1-201ENST00000388922 TIAM1Q13009 1591 aa32.24■■■□□ 2.75
ACVRL1-201ENST00000388922 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
ACVRL1-201ENST00000388922 CTTNBP2Q8WZ74 1663 aa32.2■■■□□ 2.74
ACVRL1-201ENST00000388922 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
ACVRL1-201ENST00000388922 EFCAB5A4FU69 1503 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms