Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MTMR3-212ENST00000495098 461 ntTSL 426.23■■□□□ 1.794e-8■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-202ENST00000391830 623 ntTSL 225.91■■□□□ 1.744e-8■■■■□ 25.2
XRN2Q9H0D6 RGS20-208ENST00000523064 610 ntTSL 1 (best)25.2■■□□□ 1.624e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.94■■□□□ 1.584e-8■■■■□ 25.2
XRN2Q9H0D6 ZNF444-212ENST00000593100 562 ntTSL 224.79■■□□□ 1.564e-15■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.534e-8■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.484e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.26■■□□□ 1.474e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-222ENST00000637667 874 ntTSL 1 (best)24.22■■□□□ 1.474e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.89■■□□□ 1.414e-8■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.374e-8■■■■□ 25.2
XRN2Q9H0D6 ARL6IP4-213ENST00000536073 562 ntTSL 223.34■■□□□ 1.334e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.34■■□□□ 1.334e-8■■■■□ 25.2
XRN2Q9H0D6 POLR2I-203ENST00000586439 744 ntTSL 523.24■■□□□ 1.314e-8■■■■□ 25.2
XRN2Q9H0D6 FZR1-207ENST00000591290 1331 ntTSL 523.13■■□□□ 1.299e-6■■■■□ 25.2
XRN2Q9H0D6 POLR2I-204ENST00000586789 993 ntTSL 523.11■■□□□ 1.294e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-212ENST00000636020 894 ntTSL 223.04■■□□□ 1.284e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-213ENST00000636212 1053 ntTSL 522.67■■□□□ 1.224e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.67■■□□□ 1.224e-8■■■■□ 25.2
XRN2Q9H0D6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.184e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-220ENST00000637450 868 ntTSL 322.41■■□□□ 1.184e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.41■■□□□ 1.184e-8■■■■□ 25.2
XRN2Q9H0D6 PHF23-206ENST00000572789 1006 ntTSL 222.22■■□□□ 1.157e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.15■■□□□ 1.144e-8■■■■□ 25.2
XRN2Q9H0D6 FAM117B-202ENST00000481658 768 ntTSL 1 (best)22■■□□□ 1.119e-6■■■■□ 25.2
XRN2Q9H0D6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.14e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-224ENST00000638076 2323 ntTSL 1 (best)21.83■■□□□ 1.094e-8■■■■□ 25.2
XRN2Q9H0D6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.083e-6■■■■□ 25.2
XRN2Q9H0D6 CLN6-210ENST00000635747 1181 ntTSL 521.73■■□□□ 1.074e-8■■■■□ 25.2
XRN2Q9H0D6 MYO15B-203ENST00000577613 564 ntTSL 421.7■■□□□ 1.064e-8■■■■□ 25.2
XRN2Q9H0D6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.44■■□□□ 1.024e-8■■■■□ 25.2
XRN2Q9H0D6 BMF-204ENST00000557870 505 ntTSL 321.35■■□□□ 1.011e-11■■■■□ 25.2
XRN2Q9H0D6 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.35■■□□□ 1.011e-11■■■■□ 25.2
XRN2Q9H0D6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.24■□□□□ 0.994e-8■■■■□ 25.2
XRN2Q9H0D6 RGS20-210ENST00000523414 668 ntTSL 221.23■□□□□ 0.994e-8■■■■□ 25.2
XRN2Q9H0D6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.1■□□□□ 0.979e-6■■■■□ 25.2
XRN2Q9H0D6 NANS-206ENST00000495319 764 ntTSL 321.06■□□□□ 0.964e-8■■■■□ 25.2
XRN2Q9H0D6 H2AFY2-202ENST00000455786 908 ntTSL 520.96■□□□□ 0.954e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-205ENST00000564846 1762 ntTSL 220.82■□□□□ 0.924e-8■■■■□ 25.2
XRN2Q9H0D6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.94e-8■■■■□ 25.2
XRN2Q9H0D6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.899e-6■■■■□ 25.2
XRN2Q9H0D6 ARL6IP4-212ENST00000456762 796 ntAPPRIS ALT2 TSL 220.39■□□□□ 0.854e-8■■■■□ 25.2
XRN2Q9H0D6 GTPBP6-202ENST00000485332 2016 ntTSL 220.29■□□□□ 0.844e-8■■■■□ 25.2
XRN2Q9H0D6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.774e-6■■■■□ 25.2
XRN2Q9H0D6 CLN6-218ENST00000637223 652 ntTSL 519.73■□□□□ 0.754e-8■■■■□ 25.2
XRN2Q9H0D6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.68■□□□□ 0.744e-8■■■■□ 25.2
XRN2Q9H0D6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.719e-6■■■■□ 25.2
XRN2Q9H0D6 CLN6-208ENST00000567060 945 ntTSL 219.43■□□□□ 0.74e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.43■□□□□ 0.74e-8■■■■□ 25.2
XRN2Q9H0D6 ELMO3-204ENST00000571587 780 ntTSL 519.3■□□□□ 0.689e-6■■■■□ 25.2
XRN2Q9H0D6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.689e-6■■■■□ 25.2
XRN2Q9H0D6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.22■□□□□ 0.674e-8■■■■□ 25.2
XRN2Q9H0D6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.656e-6■■■■□ 25.2
XRN2Q9H0D6 MYO15B-201ENST00000577296 494 ntTSL 418.94■□□□□ 0.624e-8■■■■□ 25.2
XRN2Q9H0D6 MIR663AHG-209ENST00000596111 505 ntTSL 518.91■□□□□ 0.624e-15■■■■□ 25.2
XRN2Q9H0D6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.584e-8■■■■□ 25.2
XRN2Q9H0D6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.59■□□□□ 0.573e-6■■■■□ 25.2
XRN2Q9H0D6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.573e-6■■■■□ 25.2
XRN2Q9H0D6 NANS-205ENST00000480925 649 ntTSL 218.34■□□□□ 0.534e-8■■■■□ 25.2
XRN2Q9H0D6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.513e-6■■■■□ 25.2
XRN2Q9H0D6 CLN6-216ENST00000636876 655 ntTSL 518.2■□□□□ 0.54e-8■■■■□ 25.2
XRN2Q9H0D6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.54e-8■■■■□ 25.2
XRN2Q9H0D6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18■□□□□ 0.472e-7■■■■□ 25.2
XRN2Q9H0D6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.95■□□□□ 0.464e-8■■■■□ 25.2
XRN2Q9H0D6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.459e-6■■■■□ 25.2
XRN2Q9H0D6 MTMR3-207ENST00000445401 665 ntTSL 317.73■□□□□ 0.434e-8■■■■□ 25.2
XRN2Q9H0D6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.424e-6■■■■□ 25.2
XRN2Q9H0D6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.389e-6■■■■□ 25.2
XRN2Q9H0D6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.43■□□□□ 0.384e-8■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.43■□□□□ 0.384e-8■■■■□ 25.2
XRN2Q9H0D6 SMG7-210ENST00000502375 566 ntTSL 517.28■□□□□ 0.364e-8■■■■□ 25.2
XRN2Q9H0D6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.21■□□□□ 0.344e-8■■■■□ 25.2
XRN2Q9H0D6 RGS20-206ENST00000518286 455 ntTSL 317.14■□□□□ 0.334e-8■■■■□ 25.2
XRN2Q9H0D6 MYO15B-215ENST00000580096 567 ntTSL 417.1■□□□□ 0.334e-8■■■■□ 25.2
XRN2Q9H0D6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.07■□□□□ 0.329e-6■■■■□ 25.2
XRN2Q9H0D6 BMF-208ENST00000560430 490 ntTSL 317.07■□□□□ 0.321e-11■■■■□ 25.2
XRN2Q9H0D6 POLR2I-206ENST00000589591 542 ntTSL 216.87■□□□□ 0.294e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.83■□□□□ 0.284e-8■■■■□ 25.2
XRN2Q9H0D6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-8■■■■□ 25.2
XRN2Q9H0D6 PNKP-223ENST00000629179 811 ntTSL 416.76■□□□□ 0.274e-8■■■■□ 25.2
XRN2Q9H0D6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.23e-6■■■■□ 25.2
XRN2Q9H0D6 MLLT10-207ENST00000430455 184 ntTSL 1 (best)16.27■□□□□ 0.24e-8■■■■□ 25.2
XRN2Q9H0D6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.25■□□□□ 0.194e-8■■■■□ 25.2
XRN2Q9H0D6 POLR2I-205ENST00000589069 582 ntTSL 216.24■□□□□ 0.194e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.184e-8■■■■□ 25.2
XRN2Q9H0D6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.08■□□□□ 0.162e-6■■■■□ 25.2
XRN2Q9H0D6 FOXP4-AS1-201ENST00000414386 419 ntTSL 215.86■□□□□ 0.134e-8■■■■□ 25.2
XRN2Q9H0D6 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.86■□□□□ 0.134e-8■■■■□ 25.2
XRN2Q9H0D6 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.122e-6■■■■□ 25.2
XRN2Q9H0D6 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.73■□□□□ 0.111e-11■■■■□ 25.2
XRN2Q9H0D6 NHEJ1-203ENST00000418099 2113 ntTSL 515.38■□□□□ 0.054e-8■■■■□ 25.2
XRN2Q9H0D6 NHEJ1-205ENST00000450447 547 ntTSL 415.24■□□□□ 0.034e-8■■■■□ 25.2
XRN2Q9H0D6 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC15.04■□□□□ -01e-11■■■■□ 25.2
XRN2Q9H0D6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.024e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-215ENST00000495130 744 ntTSL 314.74□□□□□ -0.054e-8■■■■□ 25.2
XRN2Q9H0D6 CLN6-225ENST00000638144 576 ntTSL 514.65□□□□□ -0.064e-8■■■■□ 25.2
XRN2Q9H0D6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.64□□□□□ -0.072e-6■■■■□ 25.2
XRN2Q9H0D6 MLLT10-214ENST00000480415 297 ntTSL 1 (best)14.51□□□□□ -0.094e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-209ENST00000462999 344 ntTSL 1 (best)14.51□□□□□ -0.094e-8■■■■□ 25.2
XRN2Q9H0D6 MLLT10-213ENST00000479634 165 ntTSL 1 (best)14.51□□□□□ -0.094e-8■■■■□ 25.2
Retrieved 100 of 21,068 protein–RNA pairs in 118.4 ms