RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
CLN6-216ENST00000636876 CCDC180Q9P1Z9 1646 aa33.72■■■□□ 2.99
CLN6-216ENST00000636876 ABCC9O60706 1549 aa32.75■■■□□ 2.83
CLN6-216ENST00000636876 ZCCHC6Q5VYS8 1495 aaKnown RBP31.87■■■□□ 2.69
CLN6-216ENST00000636876 DCAF8L2P0C7V8 631 aa31.67■■■□□ 2.66
CLN6-216ENST00000636876 NACADO15069 1562 aa31.6■■■□□ 2.65
CLN6-216ENST00000636876 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
CLN6-216ENST00000636876 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
CLN6-216ENST00000636876 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
CLN6-216ENST00000636876 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.52
CLN6-216ENST00000636876 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
CLN6-216ENST00000636876 DNAJC5BQ9UF47 199 aa30.74■■■□□ 2.51
CLN6-216ENST00000636876 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
CLN6-216ENST00000636876 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
CLN6-216ENST00000636876 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
CLN6-216ENST00000636876 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
CLN6-216ENST00000636876 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
CLN6-216ENST00000636876 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
CLN6-216ENST00000636876 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
CLN6-216ENST00000636876 SMARCA4P51532 1647 aa29.51■■■□□ 2.31
CLN6-216ENST00000636876 MROH2BQ7Z745 1585 aa29.41■■■□□ 2.3
CLN6-216ENST00000636876 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
CLN6-216ENST00000636876 SMARCA2P51531 1590 aa29.23■■■□□ 2.27
CLN6-216ENST00000636876 RSF1Q96T23 1441 aaPredicted RBP29.22■■■□□ 2.27
CLN6-216ENST00000636876 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
CLN6-216ENST00000636876 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
CLN6-216ENST00000636876 WIZO95785 1651 aa29.1■■■□□ 2.25
CLN6-216ENST00000636876 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
CLN6-216ENST00000636876 BAZ1BQ9UIG0 1483 aaKnown RBP29.03■■■□□ 2.24
CLN6-216ENST00000636876 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
CLN6-216ENST00000636876 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
CLN6-216ENST00000636876 CCDC88BA6NC98 1476 aa28.48■■■□□ 2.15
CLN6-216ENST00000636876 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
CLN6-216ENST00000636876 NESP48681 1621 aa28.33■■■□□ 2.13
CLN6-216ENST00000636876 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.12
CLN6-216ENST00000636876 CFTRP13569 1480 aa28.26■■■□□ 2.11
CLN6-216ENST00000636876 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
CLN6-216ENST00000636876 CUX2O14529 1486 aa28.22■■■□□ 2.11
CLN6-216ENST00000636876 DNAJC5Q9H3Z4 198 aa28.22■■■□□ 2.11
CLN6-216ENST00000636876 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
CLN6-216ENST00000636876 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
CLN6-216ENST00000636876 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CLN6-216ENST00000636876 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
CLN6-216ENST00000636876 THOC2Q8NI27 1593 aaKnown RBP27.95■■■□□ 2.07
CLN6-216ENST00000636876 CEP164Q9UPV0 1460 aa27.94■■■□□ 2.06
CLN6-216ENST00000636876 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
CLN6-216ENST00000636876 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
CLN6-216ENST00000636876 WDR62O43379 1518 aa27.7■■■□□ 2.02
CLN6-216ENST00000636876 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
CLN6-216ENST00000636876 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
CLN6-216ENST00000636876 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
CLN6-216ENST00000636876 CUX1P39880 1505 aa27.57■■■□□ 2
CLN6-216ENST00000636876 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
CLN6-216ENST00000636876 SYNJ1O43426 1573 aa27.44■■□□□ 1.98
CLN6-216ENST00000636876 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
CLN6-216ENST00000636876 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
CLN6-216ENST00000636876 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
CLN6-216ENST00000636876 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
CLN6-216ENST00000636876 IFT140Q96RY7 1462 aa27.34■■□□□ 1.97
CLN6-216ENST00000636876 SOGA1O94964 1423 aa27.3■■□□□ 1.96
CLN6-216ENST00000636876 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
CLN6-216ENST00000636876 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
CLN6-216ENST00000636876 ZNF608Q9ULD9 1512 aaPredicted RBP27.17■■□□□ 1.94
CLN6-216ENST00000636876 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
CLN6-216ENST00000636876 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
CLN6-216ENST00000636876 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
CLN6-216ENST00000636876 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CLN6-216ENST00000636876 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
CLN6-216ENST00000636876 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
CLN6-216ENST00000636876 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.92
CLN6-216ENST00000636876 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.92
CLN6-216ENST00000636876 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
CLN6-216ENST00000636876 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
CLN6-216ENST00000636876 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
CLN6-216ENST00000636876 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
CLN6-216ENST00000636876 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
CLN6-216ENST00000636876 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
CLN6-216ENST00000636876 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
CLN6-216ENST00000636876 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
CLN6-216ENST00000636876 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
CLN6-216ENST00000636876 IGF1RP08069 1367 aa26.77■■□□□ 1.88
CLN6-216ENST00000636876 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
CLN6-216ENST00000636876 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
CLN6-216ENST00000636876 EEA1Q15075 1411 aa26.71■■□□□ 1.87
CLN6-216ENST00000636876 SYNJ2O15056 1496 aa26.7■■□□□ 1.87
CLN6-216ENST00000636876 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.86
CLN6-216ENST00000636876 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.86
CLN6-216ENST00000636876 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.86
CLN6-216ENST00000636876 CUL7Q14999 1698 aa26.67■■□□□ 1.86
CLN6-216ENST00000636876 CHD1O14646 1710 aa26.66■■□□□ 1.86
CLN6-216ENST00000636876 FBLN2P98095 1184 aa26.66■■□□□ 1.86
CLN6-216ENST00000636876 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
CLN6-216ENST00000636876 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
CLN6-216ENST00000636876 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
CLN6-216ENST00000636876 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
CLN6-216ENST00000636876 GRIN2AQ12879 1464 aa26.59■■□□□ 1.85
CLN6-216ENST00000636876 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
CLN6-216ENST00000636876 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
CLN6-216ENST00000636876 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
CLN6-216ENST00000636876 NUP160Q12769 1436 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms