Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 DHRS7-208ENST00000557137 480 ntTSL 315.46■□□□□ 0.073e-6■■■□□ 18.4
SND1Q7KZF4 DHRS7-207ENST00000556502 924 ntTSL 215.11■□□□□ 0.013e-6■■■□□ 18.4
SND1Q7KZF4 DHRS7-205ENST00000554101 1361 ntTSL 215.01□□□□□ -0.013e-6■■■□□ 18.4
SND1Q7KZF4 SREBF1-207ENST00000447641 644 ntTSL 314.61□□□□□ -0.078e-11■■■□□ 18.4
SND1Q7KZF4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-6■■■□□ 18.4
SND1Q7KZF4 SREBF1-223ENST00000584760 564 ntTSL 213.72□□□□□ -0.218e-11■■■□□ 18.4
SND1Q7KZF4 PRKDC-206ENST00000536429 659 ntTSL 313.57□□□□□ -0.244e-9■■■□□ 18.4
SND1Q7KZF4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.3□□□□□ -0.289e-9■■■□□ 18.4
SND1Q7KZF4 PRKDC-207ENST00000536483 834 ntTSL 212.79□□□□□ -0.364e-9■■■□□ 18.4
SND1Q7KZF4 GALNT2-202ENST00000485438 4030 ntTSL 512.56□□□□□ -0.44e-9■■■□□ 18.4
SND1Q7KZF4 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC11.7□□□□□ -0.543e-6■■■□□ 18.4
SND1Q7KZF4 PARP1-204ENST00000463968 830 ntTSL 211.4□□□□□ -0.584e-13■■■□□ 18.4
SND1Q7KZF4 RETSAT-206ENST00000482694 601 ntTSL 25.09□□□□□ -1.593e-9■■■□□ 18.4
SND1Q7KZF4 C20orf204-201ENST00000358393 1466 ntTSL 225.88■■□□□ 1.731e-14■■■□□ 18.4
SND1Q7KZF4 C20orf204-204ENST00000463337 1412 ntAPPRIS ALT2 TSL 1 (best)23.39■■□□□ 1.331e-14■■■□□ 18.4
SND1Q7KZF4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.881e-14■■■□□ 18.4
SND1Q7KZF4 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)18.86■□□□□ 0.611e-14■■■□□ 18.4
SND1Q7KZF4 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)17.86■□□□□ 0.451e-14■■■□□ 18.4
SND1Q7KZF4 SEC61A1-207ENST00000498837 555 ntTSL 215.18■□□□□ 0.023e-22■■■□□ 18.4
SND1Q7KZF4 SLC3A2-222ENST00000546253 582 ntTSL 415.54■□□□□ 0.086e-15■■■□□ 18.4
SND1Q7KZF4 TBL2-219ENST00000488915 708 ntTSL 215.15■□□□□ 0.022e-6■■■□□ 18.4
SND1Q7KZF4 SCPEP1-215ENST00000576154 1915 ntTSL 217.6■□□□□ 0.412e-6■■■□□ 18.4
SND1Q7KZF4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-6■■■□□ 18.4
SND1Q7KZF4 SCPEP1-214ENST00000575423 1725 ntTSL 215.67■□□□□ 0.12e-6■■■□□ 18.4
SND1Q7KZF4 ADAM10-214ENST00000559053 541 ntTSL 49.36□□□□□ -0.913e-7■■■□□ 18.4
SND1Q7KZF4 ERGIC3-207ENST00000438317 590 ntTSL 311.86□□□□□ -0.517e-29■■■□□ 18.4
SND1Q7KZF4 SIGMAR1-206ENST00000478146 485 ntTSL 214.89□□□□□ -0.038e-7■■■□□ 18.4
SND1Q7KZF4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.02■■□□□ 1.284e-7■■■□□ 18.4
SND1Q7KZF4 NAGPA-206ENST00000562746 2260 ntTSL 222.26■■□□□ 1.154e-7■■■□□ 18.4
SND1Q7KZF4 NAGPA-207ENST00000563578 1494 ntTSL 321.51■■□□□ 1.034e-7■■■□□ 18.4
SND1Q7KZF4 NAGPA-213ENST00000568202 1843 ntTSL 520.01■□□□□ 0.794e-7■■■□□ 18.4
SND1Q7KZF4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.584e-7■■■□□ 18.4
SND1Q7KZF4 FBLN1-218ENST00000484531 350 ntTSL 212.5□□□□□ -0.411e-7■■■□□ 18.4
SND1Q7KZF4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.75■□□□□ 0.273e-7■■■□□ 18.4
SND1Q7KZF4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.07■□□□□ 0.481e-10■■■□□ 18.4
SND1Q7KZF4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-10■■■□□ 18.4
SND1Q7KZF4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.05■□□□□ 0.321e-10■■■□□ 18.4
SND1Q7KZF4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.398e-9■■■□□ 18.4
SND1Q7KZF4 CLPTM1-205ENST00000586915 775 ntTSL 217.82■□□□□ 0.441e-6■■■□□ 18.4
SND1Q7KZF4 TAP2-204ENST00000485701 274 ntTSL 314.08□□□□□ -0.163e-7■■■□□ 18.4
SND1Q7KZF4 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)9.07□□□□□ -0.962e-13■■■□□ 18.4
SND1Q7KZF4 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)6.12□□□□□ -1.432e-13■■■□□ 18.4
SND1Q7KZF4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.054e-45■■■□□ 18.4
SND1Q7KZF4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.24e-45■■■□□ 18.4
SND1Q7KZF4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.24e-45■■■□□ 18.4
SND1Q7KZF4 ACP2-204ENST00000525230 756 ntTSL 213.48□□□□□ -0.251e-7■■■□□ 18.3
SND1Q7KZF4 ACP2-214ENST00000534752 274 ntTSL 510.39□□□□□ -0.751e-7■■■□□ 18.3
SND1Q7KZF4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.393e-7■■■□□ 18.3
SND1Q7KZF4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.273e-7■■■□□ 18.3
SND1Q7KZF4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.243e-7■■■□□ 18.3
SND1Q7KZF4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.243e-7■■■□□ 18.3
SND1Q7KZF4 GLMP-204ENST00000472870 1188 ntTSL 514.67□□□□□ -0.063e-7■■■□□ 18.3
SND1Q7KZF4 RDH11-208ENST00000556692 801 ntTSL 25.04□□□□□ -1.62e-7■■■□□ 18.3
SND1Q7KZF4 SLC13A5-212ENST00000576323 574 ntTSL 416.61■□□□□ 0.259e-11■■■□□ 18.3
SND1Q7KZF4 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.412e-6■■■□□ 18.3
SND1Q7KZF4 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.412e-6■■■□□ 18.3
SND1Q7KZF4 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.21□□□□□ -0.454e-24■■■□□ 18.3
SND1Q7KZF4 CD63-207ENST00000548898 727 ntTSL 2 BASIC12.12□□□□□ -0.474e-24■■■□□ 18.3
SND1Q7KZF4 CD63-206ENST00000548160 648 ntTSL 2 BASIC9.49□□□□□ -0.894e-24■■■□□ 18.3
SND1Q7KZF4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.75□□□□□ -1.171e-87■■■□□ 18.3
SND1Q7KZF4 SEC24D-205ENST00000503683 602 ntTSL 46.4□□□□□ -1.381e-12■■■□□ 18.3
SND1Q7KZF4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.756e-7■■■□□ 18.3
SND1Q7KZF4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.024e-7■■■□□ 18.3
SND1Q7KZF4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.074e-7■■■□□ 18.3
SND1Q7KZF4 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.284e-7■■■□□ 18.3
SND1Q7KZF4 TMEM208-209ENST00000564649 514 ntTSL 212.28□□□□□ -0.443e-7■■■□□ 18.3
SND1Q7KZF4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.631e-16■■■□□ 18.3
SND1Q7KZF4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.2■□□□□ 0.341e-16■■■□□ 18.3
SND1Q7KZF4 PTPRF-206ENST00000429895 6312 ntTSL 1 (best)16.97■□□□□ 0.311e-16■■■□□ 18.3
SND1Q7KZF4 NRP1-209ENST00000413802 497 ntTSL 216.2■□□□□ 0.181e-8■■■□□ 18.3
SND1Q7KZF4 PTPRF-204ENST00000412568 4154 ntTSL 512.23□□□□□ -0.451e-16■■■□□ 18.3
SND1Q7KZF4 DPP4-202ENST00000413651 578 ntTSL 412□□□□□ -0.491e-8■■■□□ 18.3
SND1Q7KZF4 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC8.58□□□□□ -1.041e-8■■■□□ 18.3
SND1Q7KZF4 PIGK-205ENST00000487906 933 ntTSL 58.53□□□□□ -1.041e-8■■■□□ 18.3
SND1Q7KZF4 PIGK-204ENST00000478391 737 ntTSL 28.37□□□□□ -1.071e-8■■■□□ 18.3
SND1Q7KZF4 DPP4-205ENST00000461836 672 ntTSL 1 (best)7.01□□□□□ -1.291e-8■■■□□ 18.3
SND1Q7KZF4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.391e-8■■■□□ 18.3
SND1Q7KZF4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.92□□□□□ -1.461e-8■■■□□ 18.3
SND1Q7KZF4 PLOD1-207ENST00000481933 2339 ntTSL 212.25□□□□□ -0.457e-11■■■□□ 18.3
SND1Q7KZF4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.131e-6■■■□□ 18.2
SND1Q7KZF4 PLOD1-203ENST00000429000 886 ntTSL 516.51■□□□□ 0.235e-10■■■□□ 18.2
SND1Q7KZF4 NUCB1-208ENST00000460125 528 ntTSL 211.33□□□□□ -0.65e-12■■■□□ 18.2
SND1Q7KZF4 LAMB2-215ENST00000493571 605 ntTSL 211.3□□□□□ -0.63e-7■■■□□ 18.2
SND1Q7KZF4 APP-212ENST00000463070 582 ntTSL 28.8□□□□□ -12e-12■■■□□ 18.2
SND1Q7KZF4 MAN1B1-204ENST00000475449 905 ntTSL 316.15■□□□□ 0.184e-7■■■□□ 18.2
SND1Q7KZF4 ADAM10-206ENST00000462061 436 ntTSL 35.98□□□□□ -1.458e-7■■■□□ 18.2
SND1Q7KZF4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.08■□□□□ 0.483e-8■■■□□ 18.2
SND1Q7KZF4 SEMA3B-208ENST00000456210 2065 ntTSL 221.12■□□□□ 0.972e-8■■■□□ 18.2
SND1Q7KZF4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.03■□□□□ 0.82e-8■■■□□ 18.2
SND1Q7KZF4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.27■□□□□ 0.682e-8■■■□□ 18.2
SND1Q7KZF4 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)18.22■□□□□ 0.512e-8■■■□□ 18.2
SND1Q7KZF4 SEMA3B-203ENST00000419007 3283 ntTSL 216.9■□□□□ 0.32e-8■■■□□ 18.2
SND1Q7KZF4 ILVBL-214ENST00000600984 709 ntTSL 317.72■□□□□ 0.431e-7■■■□□ 18.2
SND1Q7KZF4 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.031e-7■■■□□ 18.2
SND1Q7KZF4 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.221e-7■■■□□ 18.2
SND1Q7KZF4 TOR1AIP1-208ENST00000528443 3685 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.561e-7■■■□□ 18.2
SND1Q7KZF4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.041e-7■■■□□ 18.2
SND1Q7KZF4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.542e-7■■■□□ 18.2
SND1Q7KZF4 DCUN1D2-203ENST00000438545 1025 ntTSL 522.4■■□□□ 1.182e-7■■■□□ 18.2
SND1Q7KZF4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.65■□□□□ 0.262e-7■■■□□ 18.2
Retrieved 100 of 13,567 protein–RNA pairs in 114.1 ms