RNA–Protein interactions for RNA: ENST00000503683.1

SEC24D-205, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-205ENST00000503683 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
SEC24D-205ENST00000503683 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
SEC24D-205ENST00000503683 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
SEC24D-205ENST00000503683 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
SEC24D-205ENST00000503683 FOXD1Q16676 465 aa16.96■□□□□ 0.31
SEC24D-205ENST00000503683 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
SEC24D-205ENST00000503683 MSH5O43196 834 aa16.04■□□□□ 0.16
SEC24D-205ENST00000503683 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
SEC24D-205ENST00000503683 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
SEC24D-205ENST00000503683 ADRA2BP18089 450 aa15.53■□□□□ 0.08
SEC24D-205ENST00000503683 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
SEC24D-205ENST00000503683 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
SEC24D-205ENST00000503683 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
SEC24D-205ENST00000503683 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
SEC24D-205ENST00000503683 CACNB1Q02641 598 aaPredicted RBP14.12□□□□□ -0.15
SEC24D-205ENST00000503683 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
SEC24D-205ENST00000503683 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
SEC24D-205ENST00000503683 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
SEC24D-205ENST00000503683 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
SEC24D-205ENST00000503683 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
SEC24D-205ENST00000503683 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
SEC24D-205ENST00000503683 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
SEC24D-205ENST00000503683 DNAJC5BQ9UF47 199 aa13.09□□□□□ -0.31
SEC24D-205ENST00000503683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
SEC24D-205ENST00000503683 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
SEC24D-205ENST00000503683 POTEHQ6S545 545 aa12.8□□□□□ -0.36
SEC24D-205ENST00000503683 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
SEC24D-205ENST00000503683 CAPN15O75808 1086 aa12.7□□□□□ -0.38
SEC24D-205ENST00000503683 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
SEC24D-205ENST00000503683 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
SEC24D-205ENST00000503683 DSG3P32926 999 aa12.63□□□□□ -0.39
SEC24D-205ENST00000503683 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
SEC24D-205ENST00000503683 ABCB7O75027 752 aa12.35□□□□□ -0.43
SEC24D-205ENST00000503683 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
SEC24D-205ENST00000503683 APLP2Q06481 763 aa12.32□□□□□ -0.44
SEC24D-205ENST00000503683 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
SEC24D-205ENST00000503683 KCNA4P22459 653 aa12.2□□□□□ -0.46
SEC24D-205ENST00000503683 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
SEC24D-205ENST00000503683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
SEC24D-205ENST00000503683 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
SEC24D-205ENST00000503683 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
SEC24D-205ENST00000503683 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
SEC24D-205ENST00000503683 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
SEC24D-205ENST00000503683 POLA2Q14181 598 aa11.9□□□□□ -0.5
SEC24D-205ENST00000503683 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
SEC24D-205ENST00000503683 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
SEC24D-205ENST00000503683 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
SEC24D-205ENST00000503683 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
SEC24D-205ENST00000503683 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
SEC24D-205ENST00000503683 HAX1O00165 279 aa11.6□□□□□ -0.55
SEC24D-205ENST00000503683 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
SEC24D-205ENST00000503683 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
SEC24D-205ENST00000503683 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
SEC24D-205ENST00000503683 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
SEC24D-205ENST00000503683 FOXD4L1Q9NU39 408 aa11.45□□□□□ -0.58
SEC24D-205ENST00000503683 FXR2P51116 673 aaKnown RBP eCLIP11.42□□□□□ -0.582e-10■■□□□ 12.3
SEC24D-205ENST00000503683 SLC4A1APQ9BWU0 796 aaKnown RBP11.41□□□□□ -0.58
SEC24D-205ENST00000503683 EVX2Q03828 476 aa11.38□□□□□ -0.59
SEC24D-205ENST00000503683 ZBTB22O15209 634 aa11.23□□□□□ -0.61
SEC24D-205ENST00000503683 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
SEC24D-205ENST00000503683 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.61
SEC24D-205ENST00000503683 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
SEC24D-205ENST00000503683 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
SEC24D-205ENST00000503683 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
SEC24D-205ENST00000503683 FBLN2P98095 1184 aa11.18□□□□□ -0.62
SEC24D-205ENST00000503683 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
SEC24D-205ENST00000503683 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
SEC24D-205ENST00000503683 LHX8Q68G74 356 aa11.07□□□□□ -0.64
SEC24D-205ENST00000503683 GABBR2O75899 941 aa11.06□□□□□ -0.64
SEC24D-205ENST00000503683 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
SEC24D-205ENST00000503683 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
SEC24D-205ENST00000503683 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
SEC24D-205ENST00000503683 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SEC24D-205ENST00000503683 SSUH2Q9Y2M2 353 aa10.99□□□□□ -0.65
SEC24D-205ENST00000503683 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
SEC24D-205ENST00000503683 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEC24D-205ENST00000503683 PLSCR2Q9NRY7 297 aa10.86□□□□□ -0.67
SEC24D-205ENST00000503683 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
SEC24D-205ENST00000503683 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
SEC24D-205ENST00000503683 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
SEC24D-205ENST00000503683 FARP1Q9Y4F1 1045 aaPredicted RBP10.75□□□□□ -0.69
SEC24D-205ENST00000503683 CLCN6P51797 869 aa10.7□□□□□ -0.7
SEC24D-205ENST00000503683 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
SEC24D-205ENST00000503683 CCDC180Q9P1Z9 1646 aa10.62□□□□□ -0.71
SEC24D-205ENST00000503683 ZNF579Q8NAF0 562 aaKnown RBP10.57□□□□□ -0.72
SEC24D-205ENST00000503683 GALR2O43603 387 aaPredicted RBP10.55□□□□□ -0.72
SEC24D-205ENST00000503683 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
SEC24D-205ENST00000503683 OTUD5Q96G74 571 aa10.5□□□□□ -0.73
SEC24D-205ENST00000503683 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
SEC24D-205ENST00000503683 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
SEC24D-205ENST00000503683 POTEMA6NI47 508 aa10.46□□□□□ -0.73
SEC24D-205ENST00000503683 PHF12Q96QT6 1004 aa10.46□□□□□ -0.73
SEC24D-205ENST00000503683 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.73
SEC24D-205ENST00000503683 POTEGQ6S5H5 508 aa10.41□□□□□ -0.74
SEC24D-205ENST00000503683 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
SEC24D-205ENST00000503683 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
SEC24D-205ENST00000503683 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
SEC24D-205ENST00000503683 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
SEC24D-205ENST00000503683 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
SEC24D-205ENST00000503683 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms