RNA–Protein interactions for RNA: ENST00000328221.5

IFITM1-201, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene IFITM1, Length 844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-201ENST00000328221 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
IFITM1-201ENST00000328221 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
IFITM1-201ENST00000328221 ABCC9O60706 1549 aa28.85■■■□□ 2.21
IFITM1-201ENST00000328221 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
IFITM1-201ENST00000328221 NACADO15069 1562 aa27.48■■□□□ 1.99
IFITM1-201ENST00000328221 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
IFITM1-201ENST00000328221 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
IFITM1-201ENST00000328221 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
IFITM1-201ENST00000328221 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
IFITM1-201ENST00000328221 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
IFITM1-201ENST00000328221 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
IFITM1-201ENST00000328221 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
IFITM1-201ENST00000328221 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
IFITM1-201ENST00000328221 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
IFITM1-201ENST00000328221 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
IFITM1-201ENST00000328221 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
IFITM1-201ENST00000328221 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
IFITM1-201ENST00000328221 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
IFITM1-201ENST00000328221 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
IFITM1-201ENST00000328221 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
IFITM1-201ENST00000328221 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
IFITM1-201ENST00000328221 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
IFITM1-201ENST00000328221 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
IFITM1-201ENST00000328221 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
IFITM1-201ENST00000328221 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
IFITM1-201ENST00000328221 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
IFITM1-201ENST00000328221 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
IFITM1-201ENST00000328221 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
IFITM1-201ENST00000328221 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
IFITM1-201ENST00000328221 CUX2O14529 1486 aa24.97■■□□□ 1.59
IFITM1-201ENST00000328221 WIZO95785 1651 aa24.85■■□□□ 1.57
IFITM1-201ENST00000328221 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
IFITM1-201ENST00000328221 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
IFITM1-201ENST00000328221 NESP48681 1621 aa24.68■■□□□ 1.54
IFITM1-201ENST00000328221 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
IFITM1-201ENST00000328221 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
IFITM1-201ENST00000328221 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
IFITM1-201ENST00000328221 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
IFITM1-201ENST00000328221 THOC2Q8NI27 1593 aaKnown RBP24.45■■□□□ 1.5
IFITM1-201ENST00000328221 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
IFITM1-201ENST00000328221 CFTRP13569 1480 aa24.34■■□□□ 1.49
IFITM1-201ENST00000328221 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
IFITM1-201ENST00000328221 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
IFITM1-201ENST00000328221 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
IFITM1-201ENST00000328221 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
IFITM1-201ENST00000328221 WDR62O43379 1518 aa24.2■■□□□ 1.46
IFITM1-201ENST00000328221 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
IFITM1-201ENST00000328221 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
IFITM1-201ENST00000328221 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
IFITM1-201ENST00000328221 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
IFITM1-201ENST00000328221 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
IFITM1-201ENST00000328221 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
IFITM1-201ENST00000328221 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
IFITM1-201ENST00000328221 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
IFITM1-201ENST00000328221 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
IFITM1-201ENST00000328221 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
IFITM1-201ENST00000328221 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
IFITM1-201ENST00000328221 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
IFITM1-201ENST00000328221 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
IFITM1-201ENST00000328221 CUX1P39880 1505 aa23.57■■□□□ 1.36
IFITM1-201ENST00000328221 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
IFITM1-201ENST00000328221 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
IFITM1-201ENST00000328221 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
IFITM1-201ENST00000328221 SOGA1O94964 1423 aa23.46■■□□□ 1.35
IFITM1-201ENST00000328221 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
IFITM1-201ENST00000328221 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
IFITM1-201ENST00000328221 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
IFITM1-201ENST00000328221 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
IFITM1-201ENST00000328221 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
IFITM1-201ENST00000328221 FBLN2P98095 1184 aa23.4■■□□□ 1.34
IFITM1-201ENST00000328221 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
IFITM1-201ENST00000328221 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
IFITM1-201ENST00000328221 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.336e-16■■■■■ 35.8
IFITM1-201ENST00000328221 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
IFITM1-201ENST00000328221 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
IFITM1-201ENST00000328221 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
IFITM1-201ENST00000328221 CHD1O14646 1710 aa23.33■■□□□ 1.32
IFITM1-201ENST00000328221 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
IFITM1-201ENST00000328221 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
IFITM1-201ENST00000328221 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
IFITM1-201ENST00000328221 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
IFITM1-201ENST00000328221 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
IFITM1-201ENST00000328221 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
IFITM1-201ENST00000328221 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
IFITM1-201ENST00000328221 TRHP20396 242 aaPredicted RBP23.21■■□□□ 1.31
IFITM1-201ENST00000328221 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
IFITM1-201ENST00000328221 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
IFITM1-201ENST00000328221 ERICH3Q5RHP9 1530 aa23.12■■□□□ 1.29
IFITM1-201ENST00000328221 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
IFITM1-201ENST00000328221 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
IFITM1-201ENST00000328221 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
IFITM1-201ENST00000328221 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
IFITM1-201ENST00000328221 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
IFITM1-201ENST00000328221 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
IFITM1-201ENST00000328221 CUL7Q14999 1698 aa22.95■■□□□ 1.26
IFITM1-201ENST00000328221 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
IFITM1-201ENST00000328221 NUP160Q12769 1436 aa22.87■■□□□ 1.25
IFITM1-201ENST00000328221 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
IFITM1-201ENST00000328221 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
IFITM1-201ENST00000328221 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms