RNA–Protein interactions for RNA: ENST00000463070.1

APP-212, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-212ENST00000463070 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
APP-212ENST00000463070 ABCC9O60706 1549 aa19.68■□□□□ 0.74
APP-212ENST00000463070 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
APP-212ENST00000463070 DNAJC5BQ9UF47 199 aa18.74■□□□□ 0.59
APP-212ENST00000463070 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
APP-212ENST00000463070 NACADO15069 1562 aa18.42■□□□□ 0.54
APP-212ENST00000463070 DCAF8L2P0C7V8 631 aa18.33■□□□□ 0.52
APP-212ENST00000463070 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
APP-212ENST00000463070 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
APP-212ENST00000463070 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
APP-212ENST00000463070 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
APP-212ENST00000463070 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
APP-212ENST00000463070 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
APP-212ENST00000463070 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
APP-212ENST00000463070 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
APP-212ENST00000463070 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
APP-212ENST00000463070 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
APP-212ENST00000463070 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
APP-212ENST00000463070 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
APP-212ENST00000463070 CUX2O14529 1486 aa17.16■□□□□ 0.34
APP-212ENST00000463070 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
APP-212ENST00000463070 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
APP-212ENST00000463070 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
APP-212ENST00000463070 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
APP-212ENST00000463070 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
APP-212ENST00000463070 NESP48681 1621 aa16.78■□□□□ 0.28
APP-212ENST00000463070 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
APP-212ENST00000463070 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
APP-212ENST00000463070 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
APP-212ENST00000463070 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
APP-212ENST00000463070 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
APP-212ENST00000463070 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
APP-212ENST00000463070 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
APP-212ENST00000463070 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
APP-212ENST00000463070 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
APP-212ENST00000463070 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
APP-212ENST00000463070 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
APP-212ENST00000463070 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
APP-212ENST00000463070 WDR62O43379 1518 aa16.41■□□□□ 0.22
APP-212ENST00000463070 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
APP-212ENST00000463070 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
APP-212ENST00000463070 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
APP-212ENST00000463070 CFTRP13569 1480 aa16.23■□□□□ 0.19
APP-212ENST00000463070 WIZO95785 1651 aa16.21■□□□□ 0.18
APP-212ENST00000463070 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
APP-212ENST00000463070 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
APP-212ENST00000463070 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
APP-212ENST00000463070 IFT140Q96RY7 1462 aa16.06■□□□□ 0.16
APP-212ENST00000463070 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
APP-212ENST00000463070 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
APP-212ENST00000463070 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
APP-212ENST00000463070 ARHGEF11O15085 1522 aa16■□□□□ 0.15
APP-212ENST00000463070 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
APP-212ENST00000463070 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
APP-212ENST00000463070 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
APP-212ENST00000463070 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
APP-212ENST00000463070 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
APP-212ENST00000463070 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
APP-212ENST00000463070 FBLN2P98095 1184 aa15.87■□□□□ 0.13
APP-212ENST00000463070 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
APP-212ENST00000463070 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
APP-212ENST00000463070 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.13
APP-212ENST00000463070 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
APP-212ENST00000463070 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
APP-212ENST00000463070 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
APP-212ENST00000463070 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
APP-212ENST00000463070 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
APP-212ENST00000463070 CHD1O14646 1710 aa15.72■□□□□ 0.11
APP-212ENST00000463070 SOGA1O94964 1423 aa15.72■□□□□ 0.11
APP-212ENST00000463070 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
APP-212ENST00000463070 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
APP-212ENST00000463070 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
APP-212ENST00000463070 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
APP-212ENST00000463070 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
APP-212ENST00000463070 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
APP-212ENST00000463070 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
APP-212ENST00000463070 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
APP-212ENST00000463070 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
APP-212ENST00000463070 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
APP-212ENST00000463070 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
APP-212ENST00000463070 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
APP-212ENST00000463070 CUX1P39880 1505 aa15.5■□□□□ 0.07
APP-212ENST00000463070 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
APP-212ENST00000463070 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
APP-212ENST00000463070 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
APP-212ENST00000463070 NUP160Q12769 1436 aa15.35■□□□□ 0.05
APP-212ENST00000463070 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
APP-212ENST00000463070 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
APP-212ENST00000463070 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
APP-212ENST00000463070 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
APP-212ENST00000463070 ERCC6L2Q5T890 1561 aa15.31■□□□□ 0.04
APP-212ENST00000463070 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
APP-212ENST00000463070 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
APP-212ENST00000463070 JPH4Q96JJ6 628 aa15.26■□□□□ 0.03
APP-212ENST00000463070 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
APP-212ENST00000463070 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
APP-212ENST00000463070 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
APP-212ENST00000463070 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
APP-212ENST00000463070 ABCC10Q5T3U5 1492 aa15.2■□□□□ 0.02
APP-212ENST00000463070 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms