RNA–Protein interactions for RNA: ENST00000463968.5

PARP1-204, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 830 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-204ENST00000463968 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
PARP1-204ENST00000463968 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
PARP1-204ENST00000463968 ABCC9O60706 1549 aa21.21■□□□□ 0.99
PARP1-204ENST00000463968 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
PARP1-204ENST00000463968 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
PARP1-204ENST00000463968 DCAF1Q9Y4B6 1507 aa20.75■□□□□ 0.91
PARP1-204ENST00000463968 NACADO15069 1562 aa20.72■□□□□ 0.91
PARP1-204ENST00000463968 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
PARP1-204ENST00000463968 RB1CC1Q8TDY2 1594 aa20.65■□□□□ 0.9
PARP1-204ENST00000463968 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
PARP1-204ENST00000463968 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
PARP1-204ENST00000463968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
PARP1-204ENST00000463968 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
PARP1-204ENST00000463968 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
PARP1-204ENST00000463968 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
PARP1-204ENST00000463968 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
PARP1-204ENST00000463968 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
PARP1-204ENST00000463968 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
PARP1-204ENST00000463968 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
PARP1-204ENST00000463968 RSF1Q96T23 1441 aaPredicted RBP19.23■□□□□ 0.67
PARP1-204ENST00000463968 SUPT5HO00267 1087 aaKnown RBP19.22■□□□□ 0.67
PARP1-204ENST00000463968 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
PARP1-204ENST00000463968 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
PARP1-204ENST00000463968 ATAD2BQ9ULI0 1458 aa19.13■□□□□ 0.65
PARP1-204ENST00000463968 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
PARP1-204ENST00000463968 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
PARP1-204ENST00000463968 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
PARP1-204ENST00000463968 WIZO95785 1651 aa19.03■□□□□ 0.64
PARP1-204ENST00000463968 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
PARP1-204ENST00000463968 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
PARP1-204ENST00000463968 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
PARP1-204ENST00000463968 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
PARP1-204ENST00000463968 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
PARP1-204ENST00000463968 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
PARP1-204ENST00000463968 CFTRP13569 1480 aa18.52■□□□□ 0.56
PARP1-204ENST00000463968 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
PARP1-204ENST00000463968 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
PARP1-204ENST00000463968 NESP48681 1621 aa18.39■□□□□ 0.53
PARP1-204ENST00000463968 FANCD2Q9BXW9 1451 aa18.36■□□□□ 0.53
PARP1-204ENST00000463968 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
PARP1-204ENST00000463968 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
PARP1-204ENST00000463968 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
PARP1-204ENST00000463968 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
PARP1-204ENST00000463968 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
PARP1-204ENST00000463968 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
PARP1-204ENST00000463968 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
PARP1-204ENST00000463968 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
PARP1-204ENST00000463968 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
PARP1-204ENST00000463968 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
PARP1-204ENST00000463968 WDR62O43379 1518 aa18.04■□□□□ 0.48
PARP1-204ENST00000463968 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
PARP1-204ENST00000463968 TOP2BQ02880 1626 aa18.03■□□□□ 0.48
PARP1-204ENST00000463968 CUX1P39880 1505 aa18.03■□□□□ 0.48
PARP1-204ENST00000463968 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
PARP1-204ENST00000463968 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
PARP1-204ENST00000463968 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
PARP1-204ENST00000463968 CUX2O14529 1486 aa17.98■□□□□ 0.47
PARP1-204ENST00000463968 SOGA1O94964 1423 aa17.98■□□□□ 0.47
PARP1-204ENST00000463968 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
PARP1-204ENST00000463968 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.47
PARP1-204ENST00000463968 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
PARP1-204ENST00000463968 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
PARP1-204ENST00000463968 KIF27Q86VH2 1401 aa17.86■□□□□ 0.45
PARP1-204ENST00000463968 RAD54L2Q9Y4B4 1467 aa17.83■□□□□ 0.45
PARP1-204ENST00000463968 EEA1Q15075 1411 aa17.83■□□□□ 0.45
PARP1-204ENST00000463968 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
PARP1-204ENST00000463968 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
PARP1-204ENST00000463968 TDRD9Q8NDG6 1382 aaKnown RBP17.78■□□□□ 0.44
PARP1-204ENST00000463968 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
PARP1-204ENST00000463968 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
PARP1-204ENST00000463968 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
PARP1-204ENST00000463968 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
PARP1-204ENST00000463968 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.421e-8■■■■■ 28.5
PARP1-204ENST00000463968 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
PARP1-204ENST00000463968 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
PARP1-204ENST00000463968 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
PARP1-204ENST00000463968 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
PARP1-204ENST00000463968 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
PARP1-204ENST00000463968 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
PARP1-204ENST00000463968 IGF1RP08069 1367 aa17.63■□□□□ 0.41
PARP1-204ENST00000463968 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
PARP1-204ENST00000463968 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
PARP1-204ENST00000463968 FBLN2P98095 1184 aa17.6■□□□□ 0.41
PARP1-204ENST00000463968 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
PARP1-204ENST00000463968 FHAD1B1AJZ9 1412 aa17.58■□□□□ 0.41
PARP1-204ENST00000463968 CUL7Q14999 1698 aa17.57■□□□□ 0.4
PARP1-204ENST00000463968 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
PARP1-204ENST00000463968 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
PARP1-204ENST00000463968 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
PARP1-204ENST00000463968 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
PARP1-204ENST00000463968 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
PARP1-204ENST00000463968 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
PARP1-204ENST00000463968 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
PARP1-204ENST00000463968 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
PARP1-204ENST00000463968 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
PARP1-204ENST00000463968 KIF21BO75037 1637 aa17.44■□□□□ 0.38
PARP1-204ENST00000463968 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
PARP1-204ENST00000463968 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
PARP1-204ENST00000463968 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
PARP1-204ENST00000463968 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms