Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF11Q9Y3C5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF11Q9Y3C5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 AC142381.2-201ENST00000566120 298 ntBASIC20.4■□□□□ 0.86
RNF11Q9Y3C5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.39■□□□□ 0.86
RNF11Q9Y3C5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF11Q9Y3C5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 AC012414.1-201ENST00000556676 535 ntBASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 AL049796.1-201ENST00000565336 1766 ntBASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF11Q9Y3C5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 AC005837.3-201ENST00000612163 286 ntBASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF11Q9Y3C5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.36■□□□□ 0.85
RNF11Q9Y3C5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF11Q9Y3C5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms