RNA–Protein interactions for RNA: ENST00000335390.5

TMEM17-201, Transcript of transmembrane protein 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM17, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM17-201ENST00000335390 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
TMEM17-201ENST00000335390 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
TMEM17-201ENST00000335390 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
TMEM17-201ENST00000335390 DCAF1Q9Y4B6 1507 aa39.09■■■■□ 3.85
TMEM17-201ENST00000335390 DCAF8L2P0C7V8 631 aa38.92■■■■□ 3.82
TMEM17-201ENST00000335390 ABCC9O60706 1549 aa38.77■■■■□ 3.8
TMEM17-201ENST00000335390 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.78
TMEM17-201ENST00000335390 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
TMEM17-201ENST00000335390 NACADO15069 1562 aa38.33■■■■□ 3.73
TMEM17-201ENST00000335390 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
TMEM17-201ENST00000335390 SCRIBQ14160 1630 aa37.77■■■■□ 3.64
TMEM17-201ENST00000335390 SUPT5HO00267 1087 aaKnown RBP37.09■■■■□ 3.53
TMEM17-201ENST00000335390 UNC13AQ9UPW8 1703 aa37.06■■■■□ 3.52
TMEM17-201ENST00000335390 BICRAQ9NZM4 1560 aa36.74■■■■□ 3.47
TMEM17-201ENST00000335390 RSF1Q96T23 1441 aaPredicted RBP36.64■■■■□ 3.46
TMEM17-201ENST00000335390 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
TMEM17-201ENST00000335390 PABPN1Q86U42 306 aaKnown RBP eCLIP36.57■■■■□ 3.44
TMEM17-201ENST00000335390 BAZ1AQ9NRL2 1556 aaPredicted RBP36.48■■■■□ 3.43
TMEM17-201ENST00000335390 MROH2BQ7Z745 1585 aa36.42■■■■□ 3.42
TMEM17-201ENST00000335390 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
TMEM17-201ENST00000335390 WIZO95785 1651 aa36.1■■■■□ 3.37
TMEM17-201ENST00000335390 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
TMEM17-201ENST00000335390 TOP2AP11388 1531 aaKnown RBP35.82■■■■□ 3.32
TMEM17-201ENST00000335390 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
TMEM17-201ENST00000335390 EIF4G1Q04637 1599 aaKnown RBP35.67■■■■□ 3.3
TMEM17-201ENST00000335390 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
TMEM17-201ENST00000335390 CHIC1Q5VXU3 224 aa35.56■■■■□ 3.28
TMEM17-201ENST00000335390 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
TMEM17-201ENST00000335390 CCDC88BA6NC98 1476 aa35.42■■■■□ 3.26
TMEM17-201ENST00000335390 NCAPD3P42695 1498 aa35.37■■■■□ 3.25
TMEM17-201ENST00000335390 HMGXB3Q12766 1538 aa35.32■■■■□ 3.25
TMEM17-201ENST00000335390 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
TMEM17-201ENST00000335390 TRIM41Q8WV44 630 aa34.93■■■■□ 3.18
TMEM17-201ENST00000335390 ABCC8Q09428 1581 aa34.65■■■■□ 3.14
TMEM17-201ENST00000335390 CFTRP13569 1480 aa34.6■■■■□ 3.13
TMEM17-201ENST00000335390 WRNQ14191 1432 aaPredicted RBP eCLIP34.52■■■■□ 3.12
TMEM17-201ENST00000335390 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
TMEM17-201ENST00000335390 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
TMEM17-201ENST00000335390 SYNJ1O43426 1573 aa34.3■■■■□ 3.08
TMEM17-201ENST00000335390 FAM9AQ8IZU1 332 aaPredicted RBP34.21■■■■□ 3.07
TMEM17-201ENST00000335390 TOP2BQ02880 1626 aa34.2■■■■□ 3.07
TMEM17-201ENST00000335390 LAMC3Q9Y6N6 1575 aa34.15■■■■□ 3.06
TMEM17-201ENST00000335390 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
TMEM17-201ENST00000335390 LOC105371045A0A1W2PR82 267 aa34.14■■■■□ 3.06
TMEM17-201ENST00000335390 EEA1Q15075 1411 aa34.13■■■■□ 3.05
TMEM17-201ENST00000335390 DNAJC5BQ9UF47 199 aa34.08■■■■□ 3.05
TMEM17-201ENST00000335390 FANCD2Q9BXW9 1451 aa34.06■■■■□ 3.04
TMEM17-201ENST00000335390 CUX1P39880 1505 aa34.06■■■■□ 3.04
TMEM17-201ENST00000335390 SOGA1O94964 1423 aa34.04■■■■□ 3.04
TMEM17-201ENST00000335390 NESP48681 1621 aa34.04■■■■□ 3.04
TMEM17-201ENST00000335390 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
TMEM17-201ENST00000335390 RUSC2Q8N2Y8 1516 aa33.87■■■■□ 3.01
TMEM17-201ENST00000335390 CSRNP3Q8WYN3 585 aa33.87■■■■□ 3.01
TMEM17-201ENST00000335390 CEP164Q9UPV0 1460 aa33.86■■■■□ 3.01
TMEM17-201ENST00000335390 DNMBPQ6XZF7 1577 aa33.78■■■■□ 3
TMEM17-201ENST00000335390 FGD5Q6ZNL6 1462 aa33.7■■■□□ 2.99
TMEM17-201ENST00000335390 TOPBP1Q92547 1522 aa33.7■■■□□ 2.98
TMEM17-201ENST00000335390 KIF27Q86VH2 1401 aa33.66■■■□□ 2.98
TMEM17-201ENST00000335390 EHMT2Q96KQ7 1210 aa33.66■■■□□ 2.98
TMEM17-201ENST00000335390 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
TMEM17-201ENST00000335390 GOLGA3Q08378 1498 aa33.61■■■□□ 2.97
TMEM17-201ENST00000335390 KIF21BO75037 1637 aa33.61■■■□□ 2.97
TMEM17-201ENST00000335390 URB2Q14146 1524 aaKnown RBP33.6■■■□□ 2.97
TMEM17-201ENST00000335390 POLA1P09884 1462 aaPredicted RBP33.54■■■□□ 2.96
TMEM17-201ENST00000335390 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
TMEM17-201ENST00000335390 CUX2O14529 1486 aa33.51■■■□□ 2.96
TMEM17-201ENST00000335390 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
TMEM17-201ENST00000335390 ABCA10Q8WWZ4 1543 aa33.44■■■□□ 2.94
TMEM17-201ENST00000335390 UBTFP17480 764 aaKnown RBP33.43■■■□□ 2.94
TMEM17-201ENST00000335390 PRXQ9BXM0 1461 aa33.42■■■□□ 2.94
TMEM17-201ENST00000335390 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
TMEM17-201ENST00000335390 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
TMEM17-201ENST00000335390 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
TMEM17-201ENST00000335390 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
TMEM17-201ENST00000335390 IGF1RP08069 1367 aa33.31■■■□□ 2.92
TMEM17-201ENST00000335390 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
TMEM17-201ENST00000335390 WDR62O43379 1518 aa33.25■■■□□ 2.91
TMEM17-201ENST00000335390 WDR97A6NE52 1622 aa33.25■■■□□ 2.91
TMEM17-201ENST00000335390 CARMIL1Q5VZK9 1371 aa33.16■■■□□ 2.9
TMEM17-201ENST00000335390 TARBP1Q13395 1621 aaKnown RBP33.16■■■□□ 2.9
TMEM17-201ENST00000335390 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
TMEM17-201ENST00000335390 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
TMEM17-201ENST00000335390 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
TMEM17-201ENST00000335390 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
TMEM17-201ENST00000335390 IFT140Q96RY7 1462 aa33.07■■■□□ 2.88
TMEM17-201ENST00000335390 CUL7Q14999 1698 aa33.07■■■□□ 2.88
TMEM17-201ENST00000335390 CLIP1P30622 1438 aa33.06■■■□□ 2.88
TMEM17-201ENST00000335390 AQRO60306 1485 aaKnown RBP eCLIP32.85■■■□□ 2.85
TMEM17-201ENST00000335390 GRIN2BQ13224 1484 aa32.83■■■□□ 2.85
TMEM17-201ENST00000335390 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
TMEM17-201ENST00000335390 VPS8Q8N3P4 1428 aa32.79■■■□□ 2.84
TMEM17-201ENST00000335390 ZNF608Q9ULD9 1512 aaPredicted RBP32.79■■■□□ 2.84
TMEM17-201ENST00000335390 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
TMEM17-201ENST00000335390 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
TMEM17-201ENST00000335390 TRIM26Q12899 539 aaPredicted RBP32.75■■■□□ 2.83
TMEM17-201ENST00000335390 EIF4G3O43432 1585 aaKnown RBP32.7■■■□□ 2.83
TMEM17-201ENST00000335390 PCGF6Q9BYE7 350 aa32.7■■■□□ 2.82
TMEM17-201ENST00000335390 ADAMTS12P58397 1594 aa32.7■■■□□ 2.82
TMEM17-201ENST00000335390 ARAP1Q96P48 1450 aa32.68■■■□□ 2.82
TMEM17-201ENST00000335390 ARHGAP35Q9NRY4 1499 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms