RNA–Protein interactions for RNA: ENST00000295766.9

TUBA1A-201, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TUBA1A, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-201ENST00000295766 NISCHQ9Y2I1 1504 aa44.97■■■■■ 4.79
TUBA1A-201ENST00000295766 CCDC180Q9P1Z9 1646 aa38.83■■■■□ 3.81
TUBA1A-201ENST00000295766 ZCCHC6Q5VYS8 1495 aaKnown RBP37.98■■■■□ 3.67
TUBA1A-201ENST00000295766 SHROOM4Q9ULL8 1493 aa37.28■■■■□ 3.56
TUBA1A-201ENST00000295766 DCAF1Q9Y4B6 1507 aa37.22■■■■□ 3.55
TUBA1A-201ENST00000295766 DCAF8L2P0C7V8 631 aa36.77■■■■□ 3.48
TUBA1A-201ENST00000295766 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
TUBA1A-201ENST00000295766 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
TUBA1A-201ENST00000295766 NACADO15069 1562 aa35.92■■■■□ 3.34
TUBA1A-201ENST00000295766 ABCC9O60706 1549 aa35.83■■■■□ 3.33
TUBA1A-201ENST00000295766 SCRIBQ14160 1630 aa35.8■■■■□ 3.32
TUBA1A-201ENST00000295766 RB1CC1Q8TDY2 1594 aa35.4■■■■□ 3.26
TUBA1A-201ENST00000295766 CHIC1Q5VXU3 224 aa35.28■■■■□ 3.24
TUBA1A-201ENST00000295766 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
TUBA1A-201ENST00000295766 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
TUBA1A-201ENST00000295766 MROH2BQ7Z745 1585 aa34.77■■■■□ 3.16
TUBA1A-201ENST00000295766 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
TUBA1A-201ENST00000295766 BAZ1AQ9NRL2 1556 aaPredicted RBP34.66■■■■□ 3.14
TUBA1A-201ENST00000295766 WIZO95785 1651 aa34.55■■■■□ 3.12
TUBA1A-201ENST00000295766 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
TUBA1A-201ENST00000295766 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
TUBA1A-201ENST00000295766 TOP2AP11388 1531 aaKnown RBP34.23■■■■□ 3.07
TUBA1A-201ENST00000295766 TRIM41Q8WV44 630 aa34.11■■■■□ 3.05
TUBA1A-201ENST00000295766 EIF4G1Q04637 1599 aaKnown RBP34.05■■■■□ 3.04
TUBA1A-201ENST00000295766 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
TUBA1A-201ENST00000295766 PEG3Q9GZU2 1588 aa33.95■■■■□ 3.03
TUBA1A-201ENST00000295766 LOC105371045A0A1W2PR82 267 aa33.93■■■■□ 3.02
TUBA1A-201ENST00000295766 SMARCA2P51531 1590 aa33.93■■■■□ 3.02
TUBA1A-201ENST00000295766 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
TUBA1A-201ENST00000295766 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
TUBA1A-201ENST00000295766 FAM9AQ8IZU1 332 aaPredicted RBP33.48■■■□□ 2.95
TUBA1A-201ENST00000295766 BAZ1BQ9UIG0 1483 aaKnown RBP33.45■■■□□ 2.95
TUBA1A-201ENST00000295766 ABCC8Q09428 1581 aa33.45■■■□□ 2.94
TUBA1A-201ENST00000295766 PCGF6Q9BYE7 350 aa33.37■■■□□ 2.93
TUBA1A-201ENST00000295766 HRCP23327 699 aa33.2■■■□□ 2.91
TUBA1A-201ENST00000295766 HMGXB3Q12766 1538 aa33.2■■■□□ 2.9
TUBA1A-201ENST00000295766 EEA1Q15075 1411 aa33.19■■■□□ 2.9
TUBA1A-201ENST00000295766 TRIM26Q12899 539 aaPredicted RBP33.18■■■□□ 2.9
TUBA1A-201ENST00000295766 WRNQ14191 1432 aaPredicted RBP eCLIP33.14■■■□□ 2.9
TUBA1A-201ENST00000295766 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
TUBA1A-201ENST00000295766 SOGA1O94964 1423 aa33■■■□□ 2.87
TUBA1A-201ENST00000295766 SYNJ1O43426 1573 aa32.97■■■□□ 2.87
TUBA1A-201ENST00000295766 EHMT2Q96KQ7 1210 aa32.94■■■□□ 2.86
TUBA1A-201ENST00000295766 CSRNP3Q8WYN3 585 aa32.86■■■□□ 2.85
TUBA1A-201ENST00000295766 TNIKQ9UKE5 1360 aa32.82■■■□□ 2.84
TUBA1A-201ENST00000295766 RUSC2Q8N2Y8 1516 aa32.81■■■□□ 2.84
TUBA1A-201ENST00000295766 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
TUBA1A-201ENST00000295766 GOLGA3Q08378 1498 aa32.76■■■□□ 2.83
TUBA1A-201ENST00000295766 BIVM-ERCC5R4GMW8 1640 aa32.75■■■□□ 2.83
TUBA1A-201ENST00000295766 KIF21BO75037 1637 aa32.71■■■□□ 2.83
TUBA1A-201ENST00000295766 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
TUBA1A-201ENST00000295766 CEP164Q9UPV0 1460 aa32.67■■■□□ 2.82
TUBA1A-201ENST00000295766 CFTRP13569 1480 aa32.66■■■□□ 2.82
TUBA1A-201ENST00000295766 PRDM2Q13029 1718 aa32.61■■■□□ 2.81
TUBA1A-201ENST00000295766 UBTFP17480 764 aaKnown RBP32.51■■■□□ 2.79
TUBA1A-201ENST00000295766 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
TUBA1A-201ENST00000295766 CUX1P39880 1505 aa32.46■■■□□ 2.79
TUBA1A-201ENST00000295766 ZEB1P37275 1124 aaPredicted RBP32.38■■■□□ 2.77
TUBA1A-201ENST00000295766 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
TUBA1A-201ENST00000295766 ERICH3Q5RHP9 1530 aa32.33■■■□□ 2.77
TUBA1A-201ENST00000295766 RAPGEF2Q9Y4G8 1499 aa32.31■■■□□ 2.76
TUBA1A-201ENST00000295766 PRXQ9BXM0 1461 aa32.25■■■□□ 2.75
TUBA1A-201ENST00000295766 CLIP1P30622 1438 aa32.25■■■□□ 2.75
TUBA1A-201ENST00000295766 PPARGC1BQ86YN6 1023 aaKnown RBP32.24■■■□□ 2.75
TUBA1A-201ENST00000295766 KIF27Q86VH2 1401 aa32.23■■■□□ 2.75
TUBA1A-201ENST00000295766 VPS8Q8N3P4 1428 aa32.11■■■□□ 2.73
TUBA1A-201ENST00000295766 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
TUBA1A-201ENST00000295766 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
TUBA1A-201ENST00000295766 CUX2O14529 1486 aa31.92■■■□□ 2.7
TUBA1A-201ENST00000295766 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
TUBA1A-201ENST00000295766 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
TUBA1A-201ENST00000295766 IGF1RP08069 1367 aa31.82■■■□□ 2.68
TUBA1A-201ENST00000295766 ARAP1Q96P48 1450 aa31.82■■■□□ 2.68
TUBA1A-201ENST00000295766 TTBK1Q5TCY1 1321 aaPredicted RBP31.8■■■□□ 2.68
TUBA1A-201ENST00000295766 APLP2Q06481 763 aa31.8■■■□□ 2.68
TUBA1A-201ENST00000295766 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
TUBA1A-201ENST00000295766 NESP48681 1621 aa31.75■■■□□ 2.67
TUBA1A-201ENST00000295766 ABCA10Q8WWZ4 1543 aa31.72■■■□□ 2.67
TUBA1A-201ENST00000295766 CCER1Q8TC90 406 aaPredicted RBP31.7■■■□□ 2.67
TUBA1A-201ENST00000295766 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
TUBA1A-201ENST00000295766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
TUBA1A-201ENST00000295766 POLA1P09884 1462 aaPredicted RBP31.68■■■□□ 2.66
TUBA1A-201ENST00000295766 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
TUBA1A-201ENST00000295766 ARHGAP35Q9NRY4 1499 aa31.64■■■□□ 2.66
TUBA1A-201ENST00000295766 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
TUBA1A-201ENST00000295766 CUL7Q14999 1698 aa31.56■■■□□ 2.64
TUBA1A-201ENST00000295766 RAD54L2Q9Y4B4 1467 aa31.56■■■□□ 2.64
TUBA1A-201ENST00000295766 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
TUBA1A-201ENST00000295766 WDR97A6NE52 1622 aa31.55■■■□□ 2.64
TUBA1A-201ENST00000295766 MAP3K1Q13233 1512 aa31.42■■■□□ 2.62
TUBA1A-201ENST00000295766 KIF21AQ7Z4S6 1674 aa31.41■■■□□ 2.62
TUBA1A-201ENST00000295766 ABCA5Q8WWZ7 1642 aa31.39■■■□□ 2.62
TUBA1A-201ENST00000295766 CTTNBP2Q8WZ74 1663 aa31.35■■■□□ 2.61
TUBA1A-201ENST00000295766 EFCAB5A4FU69 1503 aa31.34■■■□□ 2.61
TUBA1A-201ENST00000295766 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.6
TUBA1A-201ENST00000295766 HNRNPUL2Q1KMD3 747 aaKnown RBP31.32■■■□□ 2.6
TUBA1A-201ENST00000295766 RRBP1Q9P2E9 1410 aaKnown RBP31.31■■■□□ 2.6
TUBA1A-201ENST00000295766 KANK4Q5T7N3 995 aaPredicted RBP31.31■■■□□ 2.6
TUBA1A-201ENST00000295766 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
TUBA1A-201ENST00000295766 TIAM1Q13009 1591 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms