Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NPAP1Q9NZP6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
NPAP1Q9NZP6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NPAP1Q9NZP6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NPAP1Q9NZP6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPAP1Q9NZP6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPAP1Q9NZP6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPAP1Q9NZP6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPAP1Q9NZP6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
NPAP1Q9NZP6 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NPAP1Q9NZP6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
NPAP1Q9NZP6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NPAP1Q9NZP6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
NPAP1Q9NZP6 AC135731.1-201ENST00000569415 2548 ntBASIC23.92■■□□□ 1.42
NPAP1Q9NZP6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPAP1Q9NZP6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.92■■□□□ 1.42
NPAP1Q9NZP6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPAP1Q9NZP6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.91■■□□□ 1.42
NPAP1Q9NZP6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NPAP1Q9NZP6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAP1Q9NZP6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPAP1Q9NZP6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NPAP1Q9NZP6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NPAP1Q9NZP6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPAP1Q9NZP6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NPAP1Q9NZP6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAP1Q9NZP6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPAP1Q9NZP6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPAP1Q9NZP6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPAP1Q9NZP6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPAP1Q9NZP6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
NPAP1Q9NZP6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.85■■□□□ 1.41
NPAP1Q9NZP6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.85■■□□□ 1.41
NPAP1Q9NZP6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAP1Q9NZP6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPAP1Q9NZP6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.83■■□□□ 1.41
NPAP1Q9NZP6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.82■■□□□ 1.4
NPAP1Q9NZP6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAP1Q9NZP6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.81■■□□□ 1.4
NPAP1Q9NZP6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NPAP1Q9NZP6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.8■■□□□ 1.4
NPAP1Q9NZP6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.8■■□□□ 1.4
NPAP1Q9NZP6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPAP1Q9NZP6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPAP1Q9NZP6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NPAP1Q9NZP6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
NPAP1Q9NZP6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.76■■□□□ 1.39
NPAP1Q9NZP6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAP1Q9NZP6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NPAP1Q9NZP6 RPS2P35-201ENST00000443417 897 ntBASIC23.75■■□□□ 1.39
NPAP1Q9NZP6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPAP1Q9NZP6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NPAP1Q9NZP6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NPAP1Q9NZP6 WASH5P-204ENST00000632292 975 ntBASIC23.74■■□□□ 1.39
NPAP1Q9NZP6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NPAP1Q9NZP6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.73■■□□□ 1.39
NPAP1Q9NZP6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NPAP1Q9NZP6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.71■■□□□ 1.39
NPAP1Q9NZP6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.71■■□□□ 1.39
NPAP1Q9NZP6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NPAP1Q9NZP6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NPAP1Q9NZP6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NPAP1Q9NZP6 AL162393.1-201ENST00000437852 946 ntBASIC23.7■■□□□ 1.38
NPAP1Q9NZP6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.7■■□□□ 1.38
NPAP1Q9NZP6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NPAP1Q9NZP6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAP1Q9NZP6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.69■■□□□ 1.38
NPAP1Q9NZP6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
NPAP1Q9NZP6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NPAP1Q9NZP6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
NPAP1Q9NZP6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NPAP1Q9NZP6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.68■■□□□ 1.38
NPAP1Q9NZP6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NPAP1Q9NZP6 AP006261.1-201ENST00000584783 668 ntBASIC23.67■■□□□ 1.38
NPAP1Q9NZP6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPAP1Q9NZP6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPAP1Q9NZP6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPAP1Q9NZP6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NPAP1Q9NZP6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms