Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.17■■■□□ 2.74
CWC22Q9HCG8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CWC22Q9HCG8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CWC22Q9HCG8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CWC22Q9HCG8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.16■■■□□ 2.74
CWC22Q9HCG8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CWC22Q9HCG8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
CWC22Q9HCG8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CWC22Q9HCG8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.14■■■□□ 2.74
CWC22Q9HCG8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CWC22Q9HCG8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
CWC22Q9HCG8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.12■■■□□ 2.73
CWC22Q9HCG8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CWC22Q9HCG8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
CWC22Q9HCG8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CWC22Q9HCG8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CWC22Q9HCG8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.08■■■□□ 2.73
CWC22Q9HCG8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CWC22Q9HCG8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.07■■■□□ 2.72
CWC22Q9HCG8 MIR3665-201ENST00000578708 105 ntBASIC32.07■■■□□ 2.72
CWC22Q9HCG8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CWC22Q9HCG8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CWC22Q9HCG8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CWC22Q9HCG8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CWC22Q9HCG8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.05■■■□□ 2.72
CWC22Q9HCG8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
CWC22Q9HCG8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
CWC22Q9HCG8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
CWC22Q9HCG8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CWC22Q9HCG8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.02■■■□□ 2.72
CWC22Q9HCG8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
CWC22Q9HCG8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CWC22Q9HCG8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CWC22Q9HCG8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CWC22Q9HCG8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CWC22Q9HCG8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
CWC22Q9HCG8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32■■■□□ 2.71
CWC22Q9HCG8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.99■■■□□ 2.71
CWC22Q9HCG8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CWC22Q9HCG8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CWC22Q9HCG8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CWC22Q9HCG8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CWC22Q9HCG8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CWC22Q9HCG8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CWC22Q9HCG8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CWC22Q9HCG8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.93■■■□□ 2.7
CWC22Q9HCG8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CWC22Q9HCG8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CWC22Q9HCG8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.9■■■□□ 2.7
CWC22Q9HCG8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CWC22Q9HCG8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CWC22Q9HCG8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.88■■■□□ 2.69
CWC22Q9HCG8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CWC22Q9HCG8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CWC22Q9HCG8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CWC22Q9HCG8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CWC22Q9HCG8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.87■■■□□ 2.69
CWC22Q9HCG8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.87■■■□□ 2.69
CWC22Q9HCG8 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.87■■■□□ 2.69
CWC22Q9HCG8 ABHD17AP4-201ENST00000411545 909 ntBASIC31.86■■■□□ 2.69
CWC22Q9HCG8 MIR7108-201ENST00000614319 87 ntBASIC31.86■■■□□ 2.69
CWC22Q9HCG8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CWC22Q9HCG8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CWC22Q9HCG8 MIR762-201ENST00000390236 83 ntBASIC31.85■■■□□ 2.69
CWC22Q9HCG8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.85■■■□□ 2.69
CWC22Q9HCG8 DUX4L28-201ENST00000623687 678 ntBASIC31.85■■■□□ 2.69
CWC22Q9HCG8 AC087741.3-201ENST00000624270 1347 ntBASIC31.84■■■□□ 2.69
CWC22Q9HCG8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CWC22Q9HCG8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CWC22Q9HCG8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CWC22Q9HCG8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CWC22Q9HCG8 AC005559.1-201ENST00000589661 871 ntBASIC31.82■■■□□ 2.68
CWC22Q9HCG8 AC044849.2-201ENST00000606596 710 ntBASIC31.82■■■□□ 2.68
CWC22Q9HCG8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.82■■■□□ 2.68
CWC22Q9HCG8 AC139426.1-201ENST00000568218 2529 ntBASIC31.81■■■□□ 2.68
CWC22Q9HCG8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.81■■■□□ 2.68
CWC22Q9HCG8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CWC22Q9HCG8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CWC22Q9HCG8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CWC22Q9HCG8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CWC22Q9HCG8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CWC22Q9HCG8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CWC22Q9HCG8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CWC22Q9HCG8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CWC22Q9HCG8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CWC22Q9HCG8 ST7-AS1-201ENST00000456775 1889 ntBASIC31.77■■■□□ 2.68
CWC22Q9HCG8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
CWC22Q9HCG8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.76■■■□□ 2.67
CWC22Q9HCG8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
CWC22Q9HCG8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.76■■■□□ 2.67
CWC22Q9HCG8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.75■■■□□ 2.67
CWC22Q9HCG8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.75■■■□□ 2.67
CWC22Q9HCG8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CWC22Q9HCG8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.74■■■□□ 2.67
CWC22Q9HCG8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CWC22Q9HCG8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CWC22Q9HCG8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.73■■■□□ 2.67
CWC22Q9HCG8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CWC22Q9HCG8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CWC22Q9HCG8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms