Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 PSEN1-219ENST00000556951 552 ntTSL 215.82■□□□□ 0.121e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-221ENST00000557293 576 ntTSL 215.78■□□□□ 0.121e-9■■■■■ 54.1
XRN2Q9H0D6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.041e-9■■■■■ 54.1
XRN2Q9H0D6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.021e-9■■■■■ 54.1
XRN2Q9H0D6 ALG6-205ENST00000487136 729 ntTSL 514.82□□□□□ -0.041e-9■■■■■ 54.1
XRN2Q9H0D6 FP565260.6-202ENST00000625036 318 ntTSL 514.69□□□□□ -0.061e-6■■■■■ 54.1
XRN2Q9H0D6 FP565260.6-201ENST00000624810 411 ntTSL 514.69□□□□□ -0.061e-6■■■■■ 54.1
XRN2Q9H0D6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.081e-9■■■■■ 54.1
XRN2Q9H0D6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.17□□□□□ -0.141e-9■■■■■ 54.1
XRN2Q9H0D6 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.141e-9■■■■■ 54.1
XRN2Q9H0D6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.93□□□□□ -0.182e-6■■■■■ 54.1
XRN2Q9H0D6 CTBP2-212ENST00000530884 578 ntTSL 313.45□□□□□ -0.261e-9■■■■■ 54.1
XRN2Q9H0D6 CPT1A-209ENST00000569129 499 ntTSL 413.36□□□□□ -0.271e-9■■■■■ 54.1
XRN2Q9H0D6 PRKD3-203ENST00000443187 695 ntTSL 413.24□□□□□ -0.291e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-213ENST00000530930 425 ntTSL 513.11□□□□□ -0.311e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.361e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-9■■■■■ 54.1
XRN2Q9H0D6 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-9■■■■■ 54.1
XRN2Q9H0D6 AGPAT3-211ENST00000467358 3955 ntTSL 211.03□□□□□ -0.641e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-215ENST00000556011 442 ntTSL 511.03□□□□□ -0.641e-9■■■■■ 54.1
XRN2Q9H0D6 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.651e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.661e-9■■■■■ 54.1
XRN2Q9H0D6 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.71e-9■■■■■ 54.1
XRN2Q9H0D6 SFSWAP-202ENST00000535202 567 ntTSL 210.24□□□□□ -0.771e-9■■■■■ 54.1
XRN2Q9H0D6 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.772e-6■■■■■ 54.1
XRN2Q9H0D6 PSEN1-222ENST00000557356 571 ntTSL 49.17□□□□□ -0.941e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.92□□□□□ -0.981e-9■■■■■ 54.1
XRN2Q9H0D6 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.39□□□□□ -1.071e-9■■■■■ 54.1
XRN2Q9H0D6 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.081e-9■■■■■ 54.1
XRN2Q9H0D6 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.18□□□□□ -1.11e-9■■■■■ 54.1
XRN2Q9H0D6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.221e-9■■■■■ 54.1
XRN2Q9H0D6 ACVR2A-204ENST00000465329 993 ntTSL 26.61□□□□□ -1.351e-9■■■■■ 54.1
XRN2Q9H0D6 S100P-202ENST00000513778 313 ntTSL 36.46□□□□□ -1.381e-9■■■■■ 54.1
XRN2Q9H0D6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.61■■□□□ 1.054e-8■■■■■ 53.3
XRN2Q9H0D6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.73□□□□□ -0.054e-8■■■■■ 53.3
XRN2Q9H0D6 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.364e-8■■■■■ 53.3
XRN2Q9H0D6 CSNK1D-221ENST00000582844 957 ntTSL 525.55■■□□□ 1.682e-11■■■■■ 53.2
XRN2Q9H0D6 CSNK1D-207ENST00000578194 567 ntTSL 414.72□□□□□ -0.052e-11■■■■■ 53.2
XRN2Q9H0D6 METTL26-206ENST00000448973 1710 ntTSL 1 (best)26.33■■□□□ 1.813e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-210ENST00000565799 716 ntTSL 325.54■■□□□ 1.683e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.11■■□□□ 1.613e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-209ENST00000565163 485 ntTSL 322.66■■□□□ 1.223e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-213ENST00000568830 590 ntTSL 322.39■■□□□ 1.173e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-211ENST00000568077 588 ntTSL 322.39■■□□□ 1.173e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-212ENST00000568773 499 ntTSL 221.07■□□□□ 0.963e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-208ENST00000564039 518 ntTSL 220.56■□□□□ 0.883e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.13■□□□□ 0.813e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.813e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-207ENST00000456420 755 ntTSL 319.77■□□□□ 0.763e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.67■□□□□ 0.743e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.56■□□□□ 0.723e-34■■■■■ 53.2
XRN2Q9H0D6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.9■□□□□ 0.463e-34■■■■■ 53.2
XRN2Q9H0D6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 05e-8■■■■■ 53.1
XRN2Q9H0D6 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.75□□□□□ -1.011e-12■■■■■ 52.9
XRN2Q9H0D6 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.031e-12■■■■■ 52.9
XRN2Q9H0D6 GET4-206ENST00000464468 676 ntTSL 320.56■□□□□ 0.883e-11■■■■■ 52.9
XRN2Q9H0D6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.163e-11■■■■■ 52.9
XRN2Q9H0D6 AC068888.1-204ENST00000550601 711 ntTSL 317.11■□□□□ 0.333e-6■■■■■ 52.9
XRN2Q9H0D6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.14□□□□□ -0.313e-6■■■■■ 52.9
XRN2Q9H0D6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.882e-7■■■■■ 52.6
XRN2Q9H0D6 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.624e-6■■■■■ 52.3
XRN2Q9H0D6 CSNK1D-210ENST00000579308 598 ntTSL 213.05□□□□□ -0.322e-11■■■■■ 52.2
XRN2Q9H0D6 LINC00854-214ENST00000615433 874 ntAPPRIS ALT2 TSL 511.38□□□□□ -0.592e-13■■■■■ 52.2
XRN2Q9H0D6 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.682e-13■■■■■ 52.2
XRN2Q9H0D6 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.022e-13■■■■■ 52.2
XRN2Q9H0D6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.1■■□□□ 1.297e-7■■■■■ 51.9
XRN2Q9H0D6 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.251e-6■■■■■ 51.9
XRN2Q9H0D6 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.281e-6■■■■■ 51.9
XRN2Q9H0D6 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.491e-6■■■■■ 51.9
XRN2Q9H0D6 MEMO1-205ENST00000413686 769 ntTSL 319.25■□□□□ 0.671e-8■■■■■ 51.7
XRN2Q9H0D6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.71■□□□□ 0.431e-8■■■■■ 51.7
XRN2Q9H0D6 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC14.36□□□□□ -0.111e-8■■■■■ 51.7
XRN2Q9H0D6 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.391e-8■■■■■ 51.7
XRN2Q9H0D6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.09■□□□□ 0.177e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.34■□□□□ 0.057e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-230ENST00000556504 847 ntTSL 511.97□□□□□ -0.497e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-220ENST00000554950 1376 ntTSL 211.09□□□□□ -0.637e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.647e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-201ENST00000344102 2690 ntTSL 5 BASIC11□□□□□ -0.657e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.737e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.017e-13■■■■■ 51.7
XRN2Q9H0D6 WARS-205ENST00000553395 801 ntTSL 55.38□□□□□ -1.557e-13■■■■■ 51.7
XRN2Q9H0D6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.597e-13■■■■■ 51.7
XRN2Q9H0D6 NOL4L-209ENST00000485364 885 ntTSL 1 (best)28.97■■■□□ 2.233e-7■■■■■ 51.5
XRN2Q9H0D6 GNAS-251ENST00000492907 790 ntTSL 310.53□□□□□ -0.723e-7■■■■■ 51.4
XRN2Q9H0D6 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.412e-6■■■■■ 51.1
XRN2Q9H0D6 GNAS-205ENST00000338783 641 ntTSL 313.92□□□□□ -0.182e-23■■■■■ 50.6
XRN2Q9H0D6 GNAS-209ENST00000371081 730 ntTSL 2 BASIC13.92□□□□□ -0.182e-23■■■■■ 50.6
XRN2Q9H0D6 LARP4B-207ENST00000476529 613 ntTSL 317.72■□□□□ 0.439e-11■■■■■ 50.6
XRN2Q9H0D6 LARP4B-208ENST00000481118 421 ntTSL 315.31■□□□□ 0.049e-11■■■■■ 50.6
XRN2Q9H0D6 FAM3C-203ENST00000426156 662 ntTSL 532.41■■■□□ 2.786e-9■■■■■ 50.5
XRN2Q9H0D6 KLHDC10-202ENST00000463413 503 ntTSL 230.36■■■□□ 2.456e-9■■■■■ 50.5
XRN2Q9H0D6 COPS9-203ENST00000489698 640 ntTSL 229.03■■■□□ 2.246e-9■■■■■ 50.5
XRN2Q9H0D6 RERE-208ENST00000465125 396 ntTSL 527.76■■■□□ 2.036e-9■■■■■ 50.5
XRN2Q9H0D6 CMTM3-206ENST00000563672 460 ntTSL 423.75■■□□□ 1.396e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.41■■□□□ 1.346e-8■■■■■ 50.5
XRN2Q9H0D6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.41■■□□□ 1.346e-8■■■■■ 50.5
XRN2Q9H0D6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.95■■□□□ 1.266e-9■■■■■ 50.5
XRN2Q9H0D6 ARVCF-206ENST00000467828 258 ntTSL 322.82■■□□□ 1.246e-9■■■■■ 50.5
XRN2Q9H0D6 RPS2-216ENST00000534461 734 ntTSL 222.03■■□□□ 1.126e-9■■■■■ 50.5
Retrieved 100 of 21,068 protein–RNA pairs in 385.8 ms