RNA–Protein interactions for RNA: ENST00000569129.5

CPT1A-209, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-209ENST00000569129 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
CPT1A-209ENST00000569129 ABCC9O60706 1549 aa25.09■■□□□ 1.61
CPT1A-209ENST00000569129 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
CPT1A-209ENST00000569129 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
CPT1A-209ENST00000569129 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
CPT1A-209ENST00000569129 NACADO15069 1562 aa23.4■■□□□ 1.34
CPT1A-209ENST00000569129 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
CPT1A-209ENST00000569129 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
CPT1A-209ENST00000569129 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
CPT1A-209ENST00000569129 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
CPT1A-209ENST00000569129 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
CPT1A-209ENST00000569129 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
CPT1A-209ENST00000569129 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
CPT1A-209ENST00000569129 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
CPT1A-209ENST00000569129 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
CPT1A-209ENST00000569129 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
CPT1A-209ENST00000569129 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
CPT1A-209ENST00000569129 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
CPT1A-209ENST00000569129 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
CPT1A-209ENST00000569129 CUX2O14529 1486 aa21.77■■□□□ 1.07
CPT1A-209ENST00000569129 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
CPT1A-209ENST00000569129 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
CPT1A-209ENST00000569129 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
CPT1A-209ENST00000569129 NESP48681 1621 aa21.46■■□□□ 1.03
CPT1A-209ENST00000569129 HMGXB3Q12766 1538 aa21.43■■□□□ 1.02
CPT1A-209ENST00000569129 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
CPT1A-209ENST00000569129 SMARCA4P51532 1647 aa21.39■■□□□ 1.01
CPT1A-209ENST00000569129 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
CPT1A-209ENST00000569129 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
CPT1A-209ENST00000569129 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
CPT1A-209ENST00000569129 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
CPT1A-209ENST00000569129 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
CPT1A-209ENST00000569129 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
CPT1A-209ENST00000569129 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
CPT1A-209ENST00000569129 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
CPT1A-209ENST00000569129 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
CPT1A-209ENST00000569129 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
CPT1A-209ENST00000569129 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
CPT1A-209ENST00000569129 WDR62O43379 1518 aa20.91■□□□□ 0.94
CPT1A-209ENST00000569129 WIZO95785 1651 aa20.77■□□□□ 0.92
CPT1A-209ENST00000569129 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
CPT1A-209ENST00000569129 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
CPT1A-209ENST00000569129 OSCARQ8IYS5 282 aa20.69■□□□□ 0.9
CPT1A-209ENST00000569129 CFTRP13569 1480 aa20.64■□□□□ 0.89
CPT1A-209ENST00000569129 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
CPT1A-209ENST00000569129 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
CPT1A-209ENST00000569129 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
CPT1A-209ENST00000569129 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
CPT1A-209ENST00000569129 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
CPT1A-209ENST00000569129 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
CPT1A-209ENST00000569129 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
CPT1A-209ENST00000569129 ARHGEF11O15085 1522 aa20.39■□□□□ 0.85
CPT1A-209ENST00000569129 IFT140Q96RY7 1462 aa20.37■□□□□ 0.85
CPT1A-209ENST00000569129 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
CPT1A-209ENST00000569129 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
CPT1A-209ENST00000569129 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
CPT1A-209ENST00000569129 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
CPT1A-209ENST00000569129 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
CPT1A-209ENST00000569129 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
CPT1A-209ENST00000569129 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
CPT1A-209ENST00000569129 CHD1O14646 1710 aa20.17■□□□□ 0.82
CPT1A-209ENST00000569129 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
CPT1A-209ENST00000569129 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
CPT1A-209ENST00000569129 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
CPT1A-209ENST00000569129 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
CPT1A-209ENST00000569129 FBLN2P98095 1184 aa20.07■□□□□ 0.8
CPT1A-209ENST00000569129 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
CPT1A-209ENST00000569129 RAD54L2Q9Y4B4 1467 aa20.01■□□□□ 0.79
CPT1A-209ENST00000569129 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
CPT1A-209ENST00000569129 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
CPT1A-209ENST00000569129 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
CPT1A-209ENST00000569129 SOGA1O94964 1423 aa19.94■□□□□ 0.78
CPT1A-209ENST00000569129 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
CPT1A-209ENST00000569129 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
CPT1A-209ENST00000569129 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
CPT1A-209ENST00000569129 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
CPT1A-209ENST00000569129 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
CPT1A-209ENST00000569129 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
CPT1A-209ENST00000569129 CUX1P39880 1505 aa19.81■□□□□ 0.76
CPT1A-209ENST00000569129 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
CPT1A-209ENST00000569129 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
CPT1A-209ENST00000569129 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
CPT1A-209ENST00000569129 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
CPT1A-209ENST00000569129 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
CPT1A-209ENST00000569129 ABCA5Q8WWZ7 1642 aa19.63■□□□□ 0.73
CPT1A-209ENST00000569129 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
CPT1A-209ENST00000569129 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
CPT1A-209ENST00000569129 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
CPT1A-209ENST00000569129 NUP160Q12769 1436 aa19.54■□□□□ 0.72
CPT1A-209ENST00000569129 ADAMTS12P58397 1594 aa19.52■□□□□ 0.71
CPT1A-209ENST00000569129 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
CPT1A-209ENST00000569129 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
CPT1A-209ENST00000569129 KIF13AQ9H1H9 1805 aa19.44■□□□□ 0.7
CPT1A-209ENST00000569129 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
CPT1A-209ENST00000569129 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
CPT1A-209ENST00000569129 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
CPT1A-209ENST00000569129 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
CPT1A-209ENST00000569129 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
CPT1A-209ENST00000569129 JPH4Q96JJ6 628 aa19.32■□□□□ 0.68
CPT1A-209ENST00000569129 ABCC10Q5T3U5 1492 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms