RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
PSEN1-215ENST00000556011 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
PSEN1-215ENST00000556011 ABCC9O60706 1549 aa22.55■■□□□ 1.2
PSEN1-215ENST00000556011 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
PSEN1-215ENST00000556011 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
PSEN1-215ENST00000556011 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
PSEN1-215ENST00000556011 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
PSEN1-215ENST00000556011 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
PSEN1-215ENST00000556011 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-215ENST00000556011 CUX2O14529 1486 aa20.3■□□□□ 0.84
PSEN1-215ENST00000556011 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
PSEN1-215ENST00000556011 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
PSEN1-215ENST00000556011 CCDC180Q9P1Z9 1646 aa20.07■□□□□ 0.8
PSEN1-215ENST00000556011 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
PSEN1-215ENST00000556011 BICRAQ9NZM4 1560 aa19.88■□□□□ 0.77
PSEN1-215ENST00000556011 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
PSEN1-215ENST00000556011 EIF4G1Q04637 1599 aaKnown RBP19.54■□□□□ 0.72
PSEN1-215ENST00000556011 NACADO15069 1562 aa19.53■□□□□ 0.72
PSEN1-215ENST00000556011 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
PSEN1-215ENST00000556011 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
PSEN1-215ENST00000556011 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
PSEN1-215ENST00000556011 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
PSEN1-215ENST00000556011 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
PSEN1-215ENST00000556011 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
PSEN1-215ENST00000556011 SOCS7O14512 581 aa19.05■□□□□ 0.64
PSEN1-215ENST00000556011 LMTK3Q96Q04 1460 aa19.03■□□□□ 0.64
PSEN1-215ENST00000556011 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
PSEN1-215ENST00000556011 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
PSEN1-215ENST00000556011 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-215ENST00000556011 ILDR2Q71H61 639 aa18.84■□□□□ 0.61
PSEN1-215ENST00000556011 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.6
PSEN1-215ENST00000556011 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
PSEN1-215ENST00000556011 FBXO41Q8TF61 875 aa18.72■□□□□ 0.59
PSEN1-215ENST00000556011 NESP48681 1621 aa18.71■□□□□ 0.59
PSEN1-215ENST00000556011 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
PSEN1-215ENST00000556011 KDM4FA0A1W2PPD8 638 aa18.45■□□□□ 0.54
PSEN1-215ENST00000556011 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
PSEN1-215ENST00000556011 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
PSEN1-215ENST00000556011 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
PSEN1-215ENST00000556011 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
PSEN1-215ENST00000556011 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
PSEN1-215ENST00000556011 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
PSEN1-215ENST00000556011 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
PSEN1-215ENST00000556011 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
PSEN1-215ENST00000556011 WDR62O43379 1518 aa18.08■□□□□ 0.48
PSEN1-215ENST00000556011 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
PSEN1-215ENST00000556011 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
PSEN1-215ENST00000556011 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
PSEN1-215ENST00000556011 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
PSEN1-215ENST00000556011 SPATA31D1Q6ZQQ2 1576 aa17.91■□□□□ 0.46
PSEN1-215ENST00000556011 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
PSEN1-215ENST00000556011 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
PSEN1-215ENST00000556011 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PSEN1-215ENST00000556011 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
PSEN1-215ENST00000556011 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
PSEN1-215ENST00000556011 CHD1O14646 1710 aa17.66■□□□□ 0.42
PSEN1-215ENST00000556011 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-215ENST00000556011 KDM6BO15054 1643 aa17.5■□□□□ 0.39
PSEN1-215ENST00000556011 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
PSEN1-215ENST00000556011 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
PSEN1-215ENST00000556011 FBLN2P98095 1184 aa17.45■□□□□ 0.38
PSEN1-215ENST00000556011 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
PSEN1-215ENST00000556011 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
PSEN1-215ENST00000556011 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
PSEN1-215ENST00000556011 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
PSEN1-215ENST00000556011 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
PSEN1-215ENST00000556011 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
PSEN1-215ENST00000556011 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
PSEN1-215ENST00000556011 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
PSEN1-215ENST00000556011 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
PSEN1-215ENST00000556011 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
PSEN1-215ENST00000556011 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
PSEN1-215ENST00000556011 TSPOAP1O95153 1857 aa17.15■□□□□ 0.34
PSEN1-215ENST00000556011 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
PSEN1-215ENST00000556011 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
PSEN1-215ENST00000556011 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
PSEN1-215ENST00000556011 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
PSEN1-215ENST00000556011 DIP2BQ9P265 1576 aa17.01■□□□□ 0.31
PSEN1-215ENST00000556011 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
PSEN1-215ENST00000556011 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
PSEN1-215ENST00000556011 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
PSEN1-215ENST00000556011 PCF11O94913 1555 aaKnown RBP16.87■□□□□ 0.29
PSEN1-215ENST00000556011 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
PSEN1-215ENST00000556011 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
PSEN1-215ENST00000556011 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
PSEN1-215ENST00000556011 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-215ENST00000556011 HSPA2P54652 639 aa16.76■□□□□ 0.27
PSEN1-215ENST00000556011 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
PSEN1-215ENST00000556011 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-215ENST00000556011 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
PSEN1-215ENST00000556011 CFTRP13569 1480 aa16.72■□□□□ 0.27
PSEN1-215ENST00000556011 PTPRMP28827 1452 aa16.69■□□□□ 0.26
PSEN1-215ENST00000556011 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
PSEN1-215ENST00000556011 PPRC1Q5VV67 1664 aaKnown RBP16.66■□□□□ 0.26
PSEN1-215ENST00000556011 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
PSEN1-215ENST00000556011 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
PSEN1-215ENST00000556011 CEP170Q5SW79 1584 aa16.6■□□□□ 0.25
PSEN1-215ENST00000556011 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
PSEN1-215ENST00000556011 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
PSEN1-215ENST00000556011 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms